Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL603756.1-201ENST00000606511 2163 ntBASIC14.4□□□□□ -0.1
USB1Q9BQ65 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 AC006538.1-201ENST00000567905 1585 ntBASIC14.4□□□□□ -0.1
USB1Q9BQ65 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 PRAL-201ENST00000624952 3286 ntBASIC14.4□□□□□ -0.1
USB1Q9BQ65 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 HMGN1P19-201ENST00000436976 333 ntBASIC14.4□□□□□ -0.1
USB1Q9BQ65 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 RARRES2P9-201ENST00000565168 469 ntBASIC14.4□□□□□ -0.1
USB1Q9BQ65 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 AL158211.3-201ENST00000607385 239 ntBASIC14.4□□□□□ -0.1
USB1Q9BQ65 AC018529.1-201ENST00000613063 361 ntBASIC14.4□□□□□ -0.1
USB1Q9BQ65 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
USB1Q9BQ65 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 AL353705.2-201ENST00000428243 662 ntBASIC14.39□□□□□ -0.11
USB1Q9BQ65 BASP1P1-201ENST00000430708 665 ntBASIC14.39□□□□□ -0.11
USB1Q9BQ65 ZNF736P11Y-201ENST00000442535 1213 ntBASIC14.39□□□□□ -0.11
USB1Q9BQ65 ZNF736P12Y-201ENST00000443152 1243 ntBASIC14.39□□□□□ -0.11
USB1Q9BQ65 ZNF736P4Y-201ENST00000454995 1243 ntBASIC14.39□□□□□ -0.11
USB1Q9BQ65 AC125807.1-201ENST00000483097 614 ntBASIC14.39□□□□□ -0.11
USB1Q9BQ65 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 LINC01922-201ENST00000562582 719 ntBASIC14.39□□□□□ -0.11
USB1Q9BQ65 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 SNX33P1-201ENST00000592116 1762 ntBASIC14.39□□□□□ -0.11
USB1Q9BQ65 AC073439.1-201ENST00000624121 1774 ntBASIC14.39□□□□□ -0.11
USB1Q9BQ65 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms