Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC069335.1-201ENST00000489972 472 ntBASIC14.2□□□□□ -0.14
VRK1Q99986 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.2□□□□□ -0.14
VRK1Q99986 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VRK1Q99986 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.2□□□□□ -0.14
VRK1Q99986 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.2□□□□□ -0.14
VRK1Q99986 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.2□□□□□ -0.14
VRK1Q99986 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.2□□□□□ -0.14
VRK1Q99986 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VRK1Q99986 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
VRK1Q99986 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.2□□□□□ -0.14
VRK1Q99986 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.2□□□□□ -0.14
VRK1Q99986 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
VRK1Q99986 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
VRK1Q99986 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.2□□□□□ -0.14
VRK1Q99986 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.19□□□□□ -0.14
VRK1Q99986 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.19□□□□□ -0.14
VRK1Q99986 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VRK1Q99986 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.19□□□□□ -0.14
VRK1Q99986 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.19□□□□□ -0.14
VRK1Q99986 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.19□□□□□ -0.14
VRK1Q99986 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.19□□□□□ -0.14
VRK1Q99986 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VRK1Q99986 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VRK1Q99986 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.19□□□□□ -0.14
VRK1Q99986 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.19□□□□□ -0.14
VRK1Q99986 AC011467.4-201ENST00000594891 528 ntBASIC14.19□□□□□ -0.14
VRK1Q99986 AC021097.1-201ENST00000607902 574 ntBASIC14.19□□□□□ -0.14
VRK1Q99986 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.19□□□□□ -0.14
VRK1Q99986 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 Z92544.3-201ENST00000624747 417 ntBASIC14.19□□□□□ -0.14
VRK1Q99986 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 AC016027.1-202ENST00000607927 1699 ntBASIC14.19□□□□□ -0.14
VRK1Q99986 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
VRK1Q99986 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VRK1Q99986 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.19□□□□□ -0.14
VRK1Q99986 ALOX12P2-203ENST00000570921 1945 ntBASIC14.19□□□□□ -0.14
VRK1Q99986 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VRK1Q99986 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.19□□□□□ -0.14
VRK1Q99986 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK1Q99986 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.19□□□□□ -0.14
VRK1Q99986 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
VRK1Q99986 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.18□□□□□ -0.14
VRK1Q99986 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 HLA-A-202ENST00000376806 1854 ntBASIC14.18□□□□□ -0.14
VRK1Q99986 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.18□□□□□ -0.14
VRK1Q99986 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VRK1Q99986 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
VRK1Q99986 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VRK1Q99986 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.18□□□□□ -0.14
VRK1Q99986 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
VRK1Q99986 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
VRK1Q99986 KRT8P23-201ENST00000560090 1207 ntBASIC14.18□□□□□ -0.14
VRK1Q99986 MIR3909-201ENST00000579518 119 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms