Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCL13Q99616 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.39□□□□□ -0.27
CCL13Q99616 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CCL13Q99616 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.39□□□□□ -0.27
CCL13Q99616 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.39□□□□□ -0.27
CCL13Q99616 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.39□□□□□ -0.27
CCL13Q99616 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL13Q99616 AL138828.2-201ENST00000615812 383 ntBASIC13.39□□□□□ -0.27
CCL13Q99616 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL13Q99616 AC073592.8-201ENST00000624126 511 ntBASIC13.39□□□□□ -0.27
CCL13Q99616 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.39□□□□□ -0.27
CCL13Q99616 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL13Q99616 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL13Q99616 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.39□□□□□ -0.27
CCL13Q99616 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL13Q99616 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
CCL13Q99616 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCL13Q99616 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCL13Q99616 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.39□□□□□ -0.27
CCL13Q99616 KRT8P37-201ENST00000451609 1420 ntBASIC13.39□□□□□ -0.27
CCL13Q99616 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCL13Q99616 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CCL13Q99616 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.38□□□□□ -0.27
CCL13Q99616 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL13Q99616 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CCL13Q99616 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL13Q99616 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL13Q99616 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL13Q99616 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.38□□□□□ -0.27
CCL13Q99616 RPL37AP1-201ENST00000412502 279 ntBASIC13.38□□□□□ -0.27
CCL13Q99616 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL13Q99616 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
CCL13Q99616 AC097493.3-201ENST00000509725 367 ntBASIC13.38□□□□□ -0.27
CCL13Q99616 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL13Q99616 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.38□□□□□ -0.27
CCL13Q99616 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.38□□□□□ -0.27
CCL13Q99616 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CCL13Q99616 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
CCL13Q99616 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
CCL13Q99616 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL13Q99616 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CCL13Q99616 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL13Q99616 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms