Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.48□□□□□ -0.41
TRGV9Q99603 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 AC092127.1-201ENST00000567093 3455 ntBASIC12.48□□□□□ -0.41
TRGV9Q99603 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRGV9Q99603 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.48□□□□□ -0.41
TRGV9Q99603 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.48□□□□□ -0.41
TRGV9Q99603 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TRGV9Q99603 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.48□□□□□ -0.41
TRGV9Q99603 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.48□□□□□ -0.41
TRGV9Q99603 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.48□□□□□ -0.41
TRGV9Q99603 AL662844.1-201ENST00000546340 181 ntBASIC12.48□□□□□ -0.41
TRGV9Q99603 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.48□□□□□ -0.41
TRGV9Q99603 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.48□□□□□ -0.41
TRGV9Q99603 AC104692.2-201ENST00000603054 253 ntBASIC12.48□□□□□ -0.41
TRGV9Q99603 AC068137.2-201ENST00000605408 478 ntBASIC12.48□□□□□ -0.41
TRGV9Q99603 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.48□□□□□ -0.41
TRGV9Q99603 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.48□□□□□ -0.41
TRGV9Q99603 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.48□□□□□ -0.41
TRGV9Q99603 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
TRGV9Q99603 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.48□□□□□ -0.41
TRGV9Q99603 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
TRGV9Q99603 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.48□□□□□ -0.41
TRGV9Q99603 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.48□□□□□ -0.41
TRGV9Q99603 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.48□□□□□ -0.41
TRGV9Q99603 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.47□□□□□ -0.41
TRGV9Q99603 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.47□□□□□ -0.41
TRGV9Q99603 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TRGV9Q99603 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TRGV9Q99603 AC112693.3-201ENST00000624819 1983 ntBASIC12.47□□□□□ -0.41
TRGV9Q99603 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.47□□□□□ -0.41
TRGV9Q99603 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TRGV9Q99603 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.47□□□□□ -0.41
TRGV9Q99603 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.47□□□□□ -0.41
TRGV9Q99603 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.47□□□□□ -0.41
TRGV9Q99603 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.47□□□□□ -0.41
TRGV9Q99603 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.47□□□□□ -0.41
TRGV9Q99603 RNA5SP419-201ENST00000515908 135 ntBASIC12.47□□□□□ -0.41
TRGV9Q99603 AC105233.2-201ENST00000523697 349 ntBASIC12.47□□□□□ -0.41
TRGV9Q99603 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.47□□□□□ -0.41
TRGV9Q99603 AF228730.5-201ENST00000530288 346 ntBASIC12.47□□□□□ -0.41
TRGV9Q99603 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.47□□□□□ -0.41
TRGV9Q99603 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.47□□□□□ -0.41
TRGV9Q99603 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.47□□□□□ -0.41
TRGV9Q99603 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.47□□□□□ -0.41
TRGV9Q99603 AC061975.2-201ENST00000581722 295 ntBASIC12.47□□□□□ -0.41
TRGV9Q99603 SPTSSB-204ENST00000617024 1292 ntBASIC12.47□□□□□ -0.41
TRGV9Q99603 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.47□□□□□ -0.41
TRGV9Q99603 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.47□□□□□ -0.41
TRGV9Q99603 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TRGV9Q99603 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.47□□□□□ -0.41
TRGV9Q99603 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.47□□□□□ -0.41
TRGV9Q99603 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.47□□□□□ -0.41
TRGV9Q99603 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
TRGV9Q99603 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 FAM45BP-202ENST00000592932 1624 ntBASIC12.47□□□□□ -0.41
TRGV9Q99603 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRGV9Q99603 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms