Protein–RNA interactions for Protein: Q96DV4

MRPL38, 39S ribosomal protein L38, mitochondrial, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38Q96DV4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 TPM3P8-201ENST00000330554 643 ntBASIC16.49■□□□□ 0.23
MRPL38Q96DV4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 HLA-A-202ENST00000376806 1854 ntBASIC16.49■□□□□ 0.23
MRPL38Q96DV4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 ACTBP8-201ENST00000403258 1108 ntBASIC16.49■□□□□ 0.23
MRPL38Q96DV4 AC079178.1-201ENST00000420915 656 ntBASIC16.49■□□□□ 0.23
MRPL38Q96DV4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 AC016700.1-201ENST00000429424 312 ntBASIC16.49■□□□□ 0.23
MRPL38Q96DV4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 COX5BP1-201ENST00000507622 393 ntBASIC16.49■□□□□ 0.23
MRPL38Q96DV4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
MRPL38Q96DV4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 AL023775.1-201ENST00000454907 1746 ntBASIC16.48■□□□□ 0.23
MRPL38Q96DV4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 AC091046.1-201ENST00000331871 207 ntBASIC16.48■□□□□ 0.23
MRPL38Q96DV4 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 MIR33B-201ENST00000385104 96 ntBASIC16.48■□□□□ 0.23
MRPL38Q96DV4 AC104457.1-201ENST00000401024 814 ntBASIC16.48■□□□□ 0.23
MRPL38Q96DV4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 MIR5572-201ENST00000583188 137 ntBASIC16.48■□□□□ 0.23
MRPL38Q96DV4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 AP001505.2-201ENST00000616815 443 ntBASIC16.48■□□□□ 0.23
MRPL38Q96DV4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL38Q96DV4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms