Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 AC073621.1-201ENST00000392730 636 ntBASIC14.23□□□□□ -0.13
RFT1Q96AA3 AC026396.1-201ENST00000419388 421 ntBASIC14.23□□□□□ -0.13
RFT1Q96AA3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 UNC93B7-201ENST00000509439 705 ntBASIC14.23□□□□□ -0.13
RFT1Q96AA3 AC136632.2-201ENST00000512891 861 ntBASIC14.23□□□□□ -0.13
RFT1Q96AA3 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 AP001350.2-201ENST00000625104 1094 ntBASIC14.23□□□□□ -0.13
RFT1Q96AA3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.23□□□□□ -0.13
RFT1Q96AA3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.23□□□□□ -0.13
RFT1Q96AA3 AC087481.3-201ENST00000602886 1894 ntBASIC14.23□□□□□ -0.13
RFT1Q96AA3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 AC139749.1-202ENST00000617529 3139 ntBASIC14.22□□□□□ -0.13
RFT1Q96AA3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 KRT18P27-201ENST00000427733 1299 ntBASIC14.22□□□□□ -0.13
RFT1Q96AA3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 DUSP5P1-201ENST00000441325 1139 ntBASIC14.22□□□□□ -0.13
RFT1Q96AA3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 GGTLC5P-201ENST00000617623 998 ntBASIC14.22□□□□□ -0.13
RFT1Q96AA3 MIR1199-201ENST00000621445 119 ntBASIC14.22□□□□□ -0.13
RFT1Q96AA3 TP73-AS1-207ENST00000624167 988 ntBASIC14.22□□□□□ -0.13
RFT1Q96AA3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.22□□□□□ -0.13
RFT1Q96AA3 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.22□□□□□ -0.13
RFT1Q96AA3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFT1Q96AA3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.21□□□□□ -0.13
RFT1Q96AA3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms