Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.37□□□□□ -0.11
CPNE4Q96A23 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 FO393414.2-201ENST00000405153 598 ntBASIC14.37□□□□□ -0.11
CPNE4Q96A23 RPL37AP1-201ENST00000412502 279 ntBASIC14.37□□□□□ -0.11
CPNE4Q96A23 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 AL512638.1-201ENST00000457493 794 ntBASIC14.37□□□□□ -0.11
CPNE4Q96A23 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 KRT8P37-201ENST00000451609 1420 ntBASIC14.36□□□□□ -0.11
CPNE4Q96A23 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.36□□□□□ -0.11
CPNE4Q96A23 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.36□□□□□ -0.11
CPNE4Q96A23 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 AL390955.2-201ENST00000603032 514 ntBASIC14.36□□□□□ -0.11
CPNE4Q96A23 MIR6069-201ENST00000620069 79 ntBASIC14.36□□□□□ -0.11
CPNE4Q96A23 AL590560.3-201ENST00000623350 461 ntBASIC14.36□□□□□ -0.11
CPNE4Q96A23 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CPNE4Q96A23 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE4Q96A23 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE4Q96A23 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE4Q96A23 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms