Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 PKD1P1-201ENST00000458669 6805 ntBASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 AL589739.1-201ENST00000607720 493 ntBASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 AL358472.5-202ENST00000641448 1267 ntBASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 AL109936.8-201ENST00000641772 604 ntBASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 FO538757.1-201ENST00000623083 1397 ntBASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM3Q8TF72 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 AC004790.1-201ENST00000612686 536 ntBASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 AC112693.3-201ENST00000624819 1983 ntBASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM3Q8TF72 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHROOM3Q8TF72 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
SHROOM3Q8TF72 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHROOM3Q8TF72 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.21■□□□□ 0.18
SHROOM3Q8TF72 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 RPL37AP1-201ENST00000412502 279 ntBASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 AC136604.1-201ENST00000418535 575 ntBASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 AL844908.2-201ENST00000609461 460 ntBASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.2■□□□□ 0.18
SHROOM3Q8TF72 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms