Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 KLF2P3-201ENST00000451977 1087 ntBASIC17.02■□□□□ 0.32
LMO3Q8TAP4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 AC140878.1-201ENST00000565277 250 ntBASIC17.02■□□□□ 0.32
LMO3Q8TAP4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LMO3Q8TAP4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LMO3Q8TAP4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LMO3Q8TAP4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.02■□□□□ 0.31
LMO3Q8TAP4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.02■□□□□ 0.31
LMO3Q8TAP4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LMO3Q8TAP4 C18orf15-201ENST00000623680 2534 ntBASIC17.02■□□□□ 0.31
LMO3Q8TAP4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LMO3Q8TAP4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
LMO3Q8TAP4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 AC010336.2-201ENST00000564226 506 ntBASIC17.01■□□□□ 0.31
LMO3Q8TAP4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 MIR6069-201ENST00000620069 79 ntBASIC17.01■□□□□ 0.31
LMO3Q8TAP4 AC138035.3-201ENST00000622706 2791 ntBASIC17.01■□□□□ 0.31
LMO3Q8TAP4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LMO3Q8TAP4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17■□□□□ 0.31
LMO3Q8TAP4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
LMO3Q8TAP4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LMO3Q8TAP4 KRT18P28-201ENST00000453838 1332 ntBASIC17■□□□□ 0.31
LMO3Q8TAP4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17■□□□□ 0.31
LMO3Q8TAP4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17■□□□□ 0.31
LMO3Q8TAP4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17■□□□□ 0.31
LMO3Q8TAP4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LMO3Q8TAP4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17■□□□□ 0.31
LMO3Q8TAP4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LMO3Q8TAP4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17■□□□□ 0.31
LMO3Q8TAP4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LMO3Q8TAP4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LMO3Q8TAP4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LMO3Q8TAP4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LMO3Q8TAP4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17■□□□□ 0.31
LMO3Q8TAP4 LBH-203ENST00000404397 543 ntTSL 4 BASIC17■□□□□ 0.31
LMO3Q8TAP4 KRT18P64-201ENST00000434946 1219 ntBASIC17■□□□□ 0.31
LMO3Q8TAP4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17■□□□□ 0.31
LMO3Q8TAP4 AC125807.1-201ENST00000483097 614 ntBASIC17■□□□□ 0.31
LMO3Q8TAP4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17■□□□□ 0.31
LMO3Q8TAP4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17■□□□□ 0.31
LMO3Q8TAP4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms