Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 RFPL4AP1-201ENST00000530883 850 ntBASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 AC106028.4-201ENST00000614509 607 ntBASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 AL138828.2-201ENST00000615812 383 ntBASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 AC007950.2-201ENST00000615045 2347 ntBASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC148Q8NFR7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 MIR943-201ENST00000401286 94 ntBASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 FO393414.2-201ENST00000405153 598 ntBASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 TSPY26P-202ENST00000565928 3884 ntBASIC18.4■□□□□ 0.54
CCDC148Q8NFR7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.39■□□□□ 0.54
CCDC148Q8NFR7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.39■□□□□ 0.54
CCDC148Q8NFR7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC148Q8NFR7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CCDC148Q8NFR7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.39■□□□□ 0.54
CCDC148Q8NFR7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 RPL37AP1-201ENST00000412502 279 ntBASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 TREML5P-201ENST00000421694 576 ntBASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms