Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.08□□□□□ -0.15
ZIC4Q8N9L1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ZIC4Q8N9L1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ZIC4Q8N9L1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 SDHAP3-202ENST00000515467 728 ntBASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 CROCCP1-201ENST00000426910 5675 ntBASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZIC4Q8N9L1 AL513477.1-201ENST00000602865 2407 ntBASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 MRPS18AP1-201ENST00000414458 589 ntBASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 AL109936.8-201ENST00000641772 604 ntBASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 MST1L-201ENST00000442552 2185 ntBASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 CICP13-201ENST00000422015 2789 ntBASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 AC132872.4-202ENST00000622924 2756 ntBASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC4Q8N9L1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms