Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 LINC00554-201ENST00000564841 3011 ntBASIC12.51□□□□□ -0.41
C3orf56Q8N813 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 C2orf27AP3-201ENST00000434123 579 ntBASIC12.5□□□□□ -0.41
C3orf56Q8N813 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 AC079328.1-201ENST00000560358 952 ntBASIC12.5□□□□□ -0.41
C3orf56Q8N813 AL359711.2-201ENST00000563105 872 ntBASIC12.5□□□□□ -0.41
C3orf56Q8N813 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 AL021578.1-201ENST00000613646 709 ntBASIC12.5□□□□□ -0.41
C3orf56Q8N813 AL354718.3-201ENST00000616414 581 ntBASIC12.5□□□□□ -0.41
C3orf56Q8N813 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 CR382287.1-201ENST00000623954 586 ntBASIC12.5□□□□□ -0.41
C3orf56Q8N813 RHOXF1P1-202ENST00000635473 501 ntBASIC12.5□□□□□ -0.41
C3orf56Q8N813 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.5□□□□□ -0.41
C3orf56Q8N813 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 ABALON-201ENST00000629058 1903 ntBASIC12.5□□□□□ -0.41
C3orf56Q8N813 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.5□□□□□ -0.41
C3orf56Q8N813 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
C3orf56Q8N813 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C3orf56Q8N813 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.49□□□□□ -0.41
C3orf56Q8N813 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms