Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 ATP5G2P4-201ENST00000442175 420 ntBASIC13.21□□□□□ -0.29
TREML4Q6UXN2 RSL24D1P2-201ENST00000445584 366 ntBASIC13.21□□□□□ -0.29
TREML4Q6UXN2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 AC025048.6-201ENST00000634326 1161 ntBASIC13.21□□□□□ -0.29
TREML4Q6UXN2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREML4Q6UXN2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TREML4Q6UXN2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TREML4Q6UXN2 AL512652.2-201ENST00000625156 1716 ntBASIC13.21□□□□□ -0.3
TREML4Q6UXN2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TREML4Q6UXN2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TREML4Q6UXN2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
TREML4Q6UXN2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.21□□□□□ -0.3
TREML4Q6UXN2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TREML4Q6UXN2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
TREML4Q6UXN2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TREML4Q6UXN2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TREML4Q6UXN2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.21□□□□□ -0.3
TREML4Q6UXN2 AL031731.1-201ENST00000642131 2094 ntBASIC13.2□□□□□ -0.3
TREML4Q6UXN2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 AP005117.1-202ENST00000581724 1908 ntBASIC13.2□□□□□ -0.3
TREML4Q6UXN2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 NME2P1-201ENST00000426182 414 ntBASIC13.2□□□□□ -0.3
TREML4Q6UXN2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 KRT17P7-201ENST00000451704 1104 ntBASIC13.2□□□□□ -0.3
TREML4Q6UXN2 NPM1P28-201ENST00000492269 840 ntBASIC13.2□□□□□ -0.3
TREML4Q6UXN2 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 AC079140.1-201ENST00000508039 487 ntBASIC13.2□□□□□ -0.3
TREML4Q6UXN2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 TMF1P1-201ENST00000576058 373 ntBASIC13.2□□□□□ -0.3
TREML4Q6UXN2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
TREML4Q6UXN2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms