Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 AC020907.1-201ENST00000616460 1350 ntBASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 BRWD1P1-201ENST00000401091 371 ntBASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 AC022137.2-201ENST00000503482 481 ntBASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM71Q2Q1W2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 CROCCP1-201ENST00000426910 5675 ntBASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM71Q2Q1W2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 ACKR1-201ENST00000368121 1240 ntBASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 AC015910.1-201ENST00000579400 975 ntBASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 RHOXF1P1-202ENST00000635473 501 ntBASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 FLJ38576-201ENST00000623820 2459 ntBASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM71Q2Q1W2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM71Q2Q1W2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms