Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.18□□□□□ -0.14
SSX1Q16384 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.18□□□□□ -0.14
SSX1Q16384 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.18□□□□□ -0.14
SSX1Q16384 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.18□□□□□ -0.14
SSX1Q16384 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.18□□□□□ -0.14
SSX1Q16384 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SSX1Q16384 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.18□□□□□ -0.14
SSX1Q16384 AP000867.3-201ENST00000524675 377 ntBASIC14.18□□□□□ -0.14
SSX1Q16384 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.18□□□□□ -0.14
SSX1Q16384 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.18□□□□□ -0.14
SSX1Q16384 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.18□□□□□ -0.14
SSX1Q16384 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.18□□□□□ -0.14
SSX1Q16384 MIR3180-1-201ENST00000580374 94 ntBASIC14.18□□□□□ -0.14
SSX1Q16384 MIR4313-201ENST00000580760 101 ntBASIC14.18□□□□□ -0.14
SSX1Q16384 MIR3180-3-201ENST00000584616 94 ntBASIC14.18□□□□□ -0.14
SSX1Q16384 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 AL121956.5-201ENST00000625261 221 ntBASIC14.18□□□□□ -0.14
SSX1Q16384 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
SSX1Q16384 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.18□□□□□ -0.14
SSX1Q16384 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.18□□□□□ -0.14
SSX1Q16384 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSX1Q16384 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SSX1Q16384 AC067930.6-201ENST00000623257 4947 ntBASIC14.18□□□□□ -0.14
SSX1Q16384 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSX1Q16384 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.17□□□□□ -0.14
SSX1Q16384 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 LINC01230-201ENST00000625222 3017 ntBASIC14.17□□□□□ -0.14
SSX1Q16384 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.17□□□□□ -0.14
SSX1Q16384 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.17□□□□□ -0.14
SSX1Q16384 DUX4L26-201ENST00000489078 1255 ntBASIC14.17□□□□□ -0.14
SSX1Q16384 AP002469.2-201ENST00000531724 424 ntBASIC14.17□□□□□ -0.14
SSX1Q16384 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 AC012615.1-201ENST00000565797 1299 ntBASIC14.17□□□□□ -0.14
SSX1Q16384 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.17□□□□□ -0.14
SSX1Q16384 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.17□□□□□ -0.14
SSX1Q16384 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.17□□□□□ -0.14
SSX1Q16384 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.17□□□□□ -0.14
SSX1Q16384 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.17□□□□□ -0.14
SSX1Q16384 AC069148.1-201ENST00000608741 768 ntBASIC14.17□□□□□ -0.14
SSX1Q16384 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
SSX1Q16384 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSX1Q16384 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.17□□□□□ -0.14
SSX1Q16384 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms