Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CACNA1SQ13698 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CACNA1SQ13698 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.27■□□□□ 0.67
CACNA1SQ13698 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CACNA1SQ13698 AC005077.2-201ENST00000449786 690 ntBASIC19.26■□□□□ 0.67
CACNA1SQ13698 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1SQ13698 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 AC079328.1-201ENST00000560358 952 ntBASIC19.26■□□□□ 0.67
CACNA1SQ13698 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1SQ13698 AC020914.3-201ENST00000594712 304 ntBASIC19.26■□□□□ 0.67
CACNA1SQ13698 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1SQ13698 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1SQ13698 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1SQ13698 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1SQ13698 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1SQ13698 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1SQ13698 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 AC004898.1-201ENST00000451057 766 ntBASIC19.26■□□□□ 0.67
CACNA1SQ13698 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1SQ13698 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1SQ13698 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1SQ13698 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CACNA1SQ13698 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1SQ13698 AC022188.1-201ENST00000620960 1664 ntBASIC19.26■□□□□ 0.67
CACNA1SQ13698 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1SQ13698 PRORSD1P-202ENST00000563365 2154 ntBASIC19.25■□□□□ 0.67
CACNA1SQ13698 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1SQ13698 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1SQ13698 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1SQ13698 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 AC044849.1-201ENST00000519737 1188 ntBASIC19.25■□□□□ 0.67
CACNA1SQ13698 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 AP001258.2-201ENST00000529891 490 ntBASIC19.25■□□□□ 0.67
CACNA1SQ13698 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1SQ13698 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1SQ13698 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1SQ13698 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1SQ13698 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1SQ13698 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA1SQ13698 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 NUS1P3-201ENST00000423502 862 ntBASIC19.24■□□□□ 0.67
CACNA1SQ13698 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 AC073413.1-201ENST00000603927 732 ntBASIC19.24■□□□□ 0.67
CACNA1SQ13698 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 AC006001.1-201ENST00000325130 474 ntBASIC19.24■□□□□ 0.67
CACNA1SQ13698 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.24■□□□□ 0.67
CACNA1SQ13698 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 AC079178.1-201ENST00000420915 656 ntBASIC19.24■□□□□ 0.67
CACNA1SQ13698 AKR7A2P1-201ENST00000460134 915 ntBASIC19.24■□□□□ 0.67
CACNA1SQ13698 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1SQ13698 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms