Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UBE2NP61088 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBE2NP61088 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
UBE2NP61088 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBE2NP61088 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBE2NP61088 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
UBE2NP61088 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 AP001282.1-201ENST00000531301 1499 ntBASIC14.08□□□□□ -0.16
UBE2NP61088 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBE2NP61088 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.08□□□□□ -0.16
UBE2NP61088 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 AC004987.2-201ENST00000395959 1148 ntBASIC14.08□□□□□ -0.16
UBE2NP61088 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2NP61088 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2NP61088 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
UBE2NP61088 RNA5SP421-201ENST00000516864 134 ntBASIC14.08□□□□□ -0.16
UBE2NP61088 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.08□□□□□ -0.16
UBE2NP61088 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBE2NP61088 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2NP61088 AL079307.3-201ENST00000556114 283 ntBASIC14.08□□□□□ -0.16
UBE2NP61088 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.08□□□□□ -0.16
UBE2NP61088 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 AL355385.1-201ENST00000606123 409 ntBASIC14.08□□□□□ -0.16
UBE2NP61088 SPDYE12P-201ENST00000618416 771 ntBASIC14.08□□□□□ -0.16
UBE2NP61088 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2NP61088 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2NP61088 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.08□□□□□ -0.16
UBE2NP61088 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2NP61088 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBE2NP61088 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
UBE2NP61088 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBE2NP61088 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
UBE2NP61088 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2NP61088 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.08□□□□□ -0.16
UBE2NP61088 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2NP61088 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
UBE2NP61088 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2NP61088 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
UBE2NP61088 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.07□□□□□ -0.16
UBE2NP61088 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.07□□□□□ -0.16
UBE2NP61088 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.07□□□□□ -0.16
UBE2NP61088 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
UBE2NP61088 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
UBE2NP61088 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.07□□□□□ -0.16
UBE2NP61088 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
UBE2NP61088 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.07□□□□□ -0.16
UBE2NP61088 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.07□□□□□ -0.16
UBE2NP61088 AC097493.3-201ENST00000509725 367 ntBASIC14.07□□□□□ -0.16
UBE2NP61088 BANF1P1-201ENST00000553684 263 ntBASIC14.07□□□□□ -0.16
UBE2NP61088 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.07□□□□□ -0.16
UBE2NP61088 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.07□□□□□ -0.16
UBE2NP61088 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
UBE2NP61088 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 CYP4F24P-201ENST00000586049 1580 ntBASIC14.07□□□□□ -0.16
UBE2NP61088 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.07□□□□□ -0.16
UBE2NP61088 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.07□□□□□ -0.16
UBE2NP61088 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UBE2NP61088 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2NP61088 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
UBE2NP61088 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms