Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ERVFC1-1P60608 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 AL356585.2-201ENST00000625078 2396 ntBASIC12.5□□□□□ -0.41
ERVFC1-1P60608 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 AP002414.1-201ENST00000391405 1147 ntBASIC12.5□□□□□ -0.41
ERVFC1-1P60608 PCED1CP-201ENST00000419887 785 ntBASIC12.5□□□□□ -0.41
ERVFC1-1P60608 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 VENTXP5-201ENST00000523979 775 ntBASIC12.5□□□□□ -0.41
ERVFC1-1P60608 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.5□□□□□ -0.41
ERVFC1-1P60608 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.5□□□□□ -0.41
ERVFC1-1P60608 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.5□□□□□ -0.41
ERVFC1-1P60608 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 ACTG1P4-201ENST00000425123 1122 ntBASIC12.49□□□□□ -0.41
ERVFC1-1P60608 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ERVFC1-1P60608 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms