Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAV3P56539 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAV3P56539 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAV3P56539 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAV3P56539 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CAV3P56539 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAV3P56539 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAV3P56539 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAV3P56539 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAV3P56539 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAV3P56539 LINC00552-201ENST00000625151 2579 ntBASIC14.33□□□□□ -0.11
CAV3P56539 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.33□□□□□ -0.11
CAV3P56539 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAV3P56539 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.33□□□□□ -0.11
CAV3P56539 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CAV3P56539 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CAV3P56539 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 AC005622.1-201ENST00000636801 1703 ntBASIC14.33□□□□□ -0.12
CAV3P56539 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.33□□□□□ -0.12
CAV3P56539 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CAV3P56539 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.33□□□□□ -0.12
CAV3P56539 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.33□□□□□ -0.12
CAV3P56539 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.33□□□□□ -0.12
CAV3P56539 PMS2P1-201ENST00000431037 1228 ntBASIC14.33□□□□□ -0.12
CAV3P56539 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.33□□□□□ -0.12
CAV3P56539 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.33□□□□□ -0.12
CAV3P56539 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CAV3P56539 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.33□□□□□ -0.12
CAV3P56539 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.33□□□□□ -0.12
CAV3P56539 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.33□□□□□ -0.12
CAV3P56539 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.33□□□□□ -0.12
CAV3P56539 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.33□□□□□ -0.12
CAV3P56539 CYP2A7P1-201ENST00000595391 815 ntBASIC14.33□□□□□ -0.12
CAV3P56539 AL139424.1-201ENST00000607572 797 ntBASIC14.33□□□□□ -0.12
CAV3P56539 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
CAV3P56539 AC004706.3-202ENST00000621574 984 ntBASIC14.33□□□□□ -0.12
CAV3P56539 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.33□□□□□ -0.12
CAV3P56539 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CAV3P56539 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CAV3P56539 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CAV3P56539 SLC22A20-204ENST00000530038 1673 ntBASIC14.33□□□□□ -0.12
CAV3P56539 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAV3P56539 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.32□□□□□ -0.12
CAV3P56539 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.32□□□□□ -0.12
CAV3P56539 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
CAV3P56539 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.32□□□□□ -0.12
CAV3P56539 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.32□□□□□ -0.12
CAV3P56539 AC007292.2-201ENST00000593524 1812 ntBASIC14.32□□□□□ -0.12
CAV3P56539 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CAV3P56539 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CAV3P56539 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CAV3P56539 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.32□□□□□ -0.12
CAV3P56539 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CAV3P56539 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CAV3P56539 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.32□□□□□ -0.12
CAV3P56539 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.32□□□□□ -0.12
CAV3P56539 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CAV3P56539 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.32□□□□□ -0.12
CAV3P56539 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.32□□□□□ -0.12
CAV3P56539 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.32□□□□□ -0.12
CAV3P56539 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.32□□□□□ -0.12
CAV3P56539 AC008735.5-201ENST00000623544 497 ntBASIC14.32□□□□□ -0.12
CAV3P56539 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.32□□□□□ -0.12
CAV3P56539 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CAV3P56539 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.32□□□□□ -0.12
CAV3P56539 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CAV3P56539 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.32□□□□□ -0.12
CAV3P56539 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.32□□□□□ -0.12
CAV3P56539 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.32□□□□□ -0.12
CAV3P56539 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.32□□□□□ -0.12
CAV3P56539 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms