Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.42□□□□□ -0.1
SUMO3P55854 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.42□□□□□ -0.1
SUMO3P55854 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.42□□□□□ -0.1
SUMO3P55854 AC055876.3-201ENST00000431496 288 ntBASIC14.42□□□□□ -0.1
SUMO3P55854 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.42□□□□□ -0.1
SUMO3P55854 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.42□□□□□ -0.1
SUMO3P55854 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.42□□□□□ -0.1
SUMO3P55854 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.42□□□□□ -0.1
SUMO3P55854 AL512361.1-201ENST00000554200 418 ntBASIC14.42□□□□□ -0.1
SUMO3P55854 DUX4L27-201ENST00000554796 1261 ntBASIC14.42□□□□□ -0.1
SUMO3P55854 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SUMO3P55854 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.42□□□□□ -0.1
SUMO3P55854 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 AC074044.1-201ENST00000609673 707 ntBASIC14.42□□□□□ -0.1
SUMO3P55854 AC138649.4-201ENST00000612222 287 ntBASIC14.42□□□□□ -0.1
SUMO3P55854 AC106028.4-201ENST00000614509 607 ntBASIC14.42□□□□□ -0.1
SUMO3P55854 AC093512.1-201ENST00000617969 520 ntBASIC14.42□□□□□ -0.1
SUMO3P55854 AL590560.3-201ENST00000623350 461 ntBASIC14.42□□□□□ -0.1
SUMO3P55854 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.42□□□□□ -0.1
SUMO3P55854 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.42□□□□□ -0.1
SUMO3P55854 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
SUMO3P55854 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.42□□□□□ -0.1
SUMO3P55854 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SUMO3P55854 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.42□□□□□ -0.1
SUMO3P55854 AC018892.3-201ENST00000623986 2499 ntBASIC14.42□□□□□ -0.1
SUMO3P55854 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SUMO3P55854 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SUMO3P55854 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.42□□□□□ -0.1
SUMO3P55854 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
SUMO3P55854 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.41□□□□□ -0.1
SUMO3P55854 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.41□□□□□ -0.1
SUMO3P55854 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.41□□□□□ -0.1
SUMO3P55854 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.41□□□□□ -0.1
SUMO3P55854 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.41□□□□□ -0.1
SUMO3P55854 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.41□□□□□ -0.1
SUMO3P55854 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.41□□□□□ -0.1
SUMO3P55854 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SUMO3P55854 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
SUMO3P55854 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SUMO3P55854 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SUMO3P55854 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.41□□□□□ -0.1
SUMO3P55854 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.41□□□□□ -0.1
SUMO3P55854 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.41□□□□□ -0.1
SUMO3P55854 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.41□□□□□ -0.1
SUMO3P55854 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.41□□□□□ -0.1
SUMO3P55854 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.41□□□□□ -0.1
SUMO3P55854 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.41□□□□□ -0.1
SUMO3P55854 TARDBPP1-201ENST00000442013 1203 ntBASIC14.41□□□□□ -0.1
SUMO3P55854 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.41□□□□□ -0.1
SUMO3P55854 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.41□□□□□ -0.1
SUMO3P55854 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.41□□□□□ -0.1
SUMO3P55854 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.41□□□□□ -0.1
SUMO3P55854 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.41□□□□□ -0.1
SUMO3P55854 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.41□□□□□ -0.1
SUMO3P55854 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SUMO3P55854 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SUMO3P55854 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.41□□□□□ -0.1
SUMO3P55854 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SUMO3P55854 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.41□□□□□ -0.1
SUMO3P55854 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.41□□□□□ -0.1
SUMO3P55854 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
SUMO3P55854 FER1L4-210ENST00000615531 5998 ntBASIC14.41□□□□□ -0.1
SUMO3P55854 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SUMO3P55854 NFIC-211ENST00000641145 8399 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms