Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH12P55289 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH12P55289 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH12P55289 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDH12P55289 AC025580.3-201ENST00000617932 1424 ntBASIC14.94□□□□□ -0.02
CDH12P55289 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH12P55289 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH12P55289 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH12P55289 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CDH12P55289 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH12P55289 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
CDH12P55289 AC093724.1-201ENST00000448659 1027 ntBASIC14.94□□□□□ -0.02
CDH12P55289 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH12P55289 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH12P55289 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH12P55289 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH12P55289 AC034105.1-201ENST00000563488 319 ntBASIC14.94□□□□□ -0.02
CDH12P55289 AC145285.3-201ENST00000564603 959 ntBASIC14.94□□□□□ -0.02
CDH12P55289 AC018845.2-201ENST00000568326 409 ntBASIC14.94□□□□□ -0.02
CDH12P55289 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH12P55289 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH12P55289 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 AC004877.2-201ENST00000623941 599 ntBASIC14.94□□□□□ -0.02
CDH12P55289 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH12P55289 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH12P55289 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH12P55289 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDH12P55289 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH12P55289 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH12P55289 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDH12P55289 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH12P55289 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH12P55289 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 BCAR1-209ENST00000546196 1340 ntBASIC14.93□□□□□ -0.02
CDH12P55289 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDH12P55289 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH12P55289 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 AC140658.5-201ENST00000438532 169 ntBASIC14.93□□□□□ -0.02
CDH12P55289 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH12P55289 KRT18P34-201ENST00000488218 1270 ntBASIC14.93□□□□□ -0.02
CDH12P55289 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.93□□□□□ -0.02
CDH12P55289 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH12P55289 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CDH12P55289 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH12P55289 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH12P55289 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH12P55289 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH12P55289 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH12P55289 AC064836.3-201ENST00000607928 673 ntBASIC14.93□□□□□ -0.02
CDH12P55289 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH12P55289 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH12P55289 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH12P55289 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH12P55289 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH12P55289 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH12P55289 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH12P55289 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms