Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.28■□□□□ 0.52
HMGCS2P54868 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.28■□□□□ 0.52
HMGCS2P54868 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCS2P54868 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.28■□□□□ 0.52
HMGCS2P54868 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCS2P54868 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.28■□□□□ 0.52
HMGCS2P54868 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCS2P54868 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HMGCS2P54868 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCS2P54868 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCS2P54868 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HMGCS2P54868 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.27■□□□□ 0.52
HMGCS2P54868 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGCS2P54868 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCS2P54868 DRD5P1-201ENST00000456605 1438 ntBASIC18.27■□□□□ 0.52
HMGCS2P54868 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCS2P54868 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCS2P54868 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCS2P54868 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.27■□□□□ 0.52
HMGCS2P54868 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.27■□□□□ 0.52
HMGCS2P54868 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HMGCS2P54868 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGCS2P54868 YBX1P6-201ENST00000442962 1002 ntBASIC18.27■□□□□ 0.52
HMGCS2P54868 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.27■□□□□ 0.52
HMGCS2P54868 AC026410.3-201ENST00000514280 936 ntBASIC18.27■□□□□ 0.52
HMGCS2P54868 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGCS2P54868 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGCS2P54868 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCS2P54868 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.27■□□□□ 0.52
HMGCS2P54868 AC010328.2-201ENST00000597698 1111 ntBASIC18.27■□□□□ 0.52
HMGCS2P54868 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCS2P54868 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.27■□□□□ 0.51
HMGCS2P54868 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMGCS2P54868 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HMGCS2P54868 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HMGCS2P54868 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
HMGCS2P54868 AC020907.1-201ENST00000616460 1350 ntBASIC18.27■□□□□ 0.51
HMGCS2P54868 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMGCS2P54868 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
HMGCS2P54868 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMGCS2P54868 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
HMGCS2P54868 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMGCS2P54868 AC079328.2-201ENST00000561241 3354 ntBASIC18.27■□□□□ 0.51
HMGCS2P54868 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.26■□□□□ 0.51
HMGCS2P54868 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HMGCS2P54868 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGCS2P54868 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HMGCS2P54868 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HMGCS2P54868 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HMGCS2P54868 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGCS2P54868 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGCS2P54868 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HMGCS2P54868 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGCS2P54868 AC099548.2-209ENST00000480264 625 ntBASIC18.26■□□□□ 0.51
HMGCS2P54868 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
HMGCS2P54868 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.26■□□□□ 0.51
HMGCS2P54868 GNRHR2-203ENST00000581100 1187 ntBASIC18.26■□□□□ 0.51
HMGCS2P54868 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.26■□□□□ 0.51
HMGCS2P54868 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.26■□□□□ 0.51
HMGCS2P54868 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 AC006449.6-201ENST00000612330 2296 ntBASIC18.26■□□□□ 0.51
HMGCS2P54868 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HMGCS2P54868 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.26■□□□□ 0.51
HMGCS2P54868 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGCS2P54868 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HMGCS2P54868 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGCS2P54868 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCS2P54868 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS2P54868 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.25■□□□□ 0.51
HMGCS2P54868 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS2P54868 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS2P54868 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS2P54868 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGCS2P54868 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HMGCS2P54868 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS2P54868 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.25■□□□□ 0.51
HMGCS2P54868 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS2P54868 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS2P54868 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HMGCS2P54868 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HMGCS2P54868 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS2P54868 AC022137.2-201ENST00000503482 481 ntBASIC18.25■□□□□ 0.51
HMGCS2P54868 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.25■□□□□ 0.51
HMGCS2P54868 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGCS2P54868 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGCS2P54868 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGCS2P54868 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms