Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.94■□□□□ 0.3
CACNA2D1P54289 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.94■□□□□ 0.3
CACNA2D1P54289 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CACNA2D1P54289 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CACNA2D1P54289 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CACNA2D1P54289 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.94■□□□□ 0.3
CACNA2D1P54289 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CACNA2D1P54289 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CACNA2D1P54289 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CACNA2D1P54289 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.94■□□□□ 0.3
CACNA2D1P54289 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CACNA2D1P54289 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CACNA2D1P54289 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.94■□□□□ 0.3
CACNA2D1P54289 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CACNA2D1P54289 AC022188.1-201ENST00000620960 1664 ntBASIC16.94■□□□□ 0.3
CACNA2D1P54289 AC105917.1-201ENST00000506637 2539 ntBASIC16.94■□□□□ 0.3
CACNA2D1P54289 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CACNA2D1P54289 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CACNA2D1P54289 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CACNA2D1P54289 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CACNA2D1P54289 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CACNA2D1P54289 MTHFR-217ENST00000641820 1569 ntBASIC16.94■□□□□ 0.3
CACNA2D1P54289 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.93■□□□□ 0.3
CACNA2D1P54289 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.93■□□□□ 0.3
CACNA2D1P54289 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 AC004987.2-201ENST00000395959 1148 ntBASIC16.93■□□□□ 0.3
CACNA2D1P54289 AL035633.1-201ENST00000406139 838 ntBASIC16.93■□□□□ 0.3
CACNA2D1P54289 AZGP1P1-201ENST00000411909 902 ntBASIC16.93■□□□□ 0.3
CACNA2D1P54289 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.93■□□□□ 0.3
CACNA2D1P54289 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CACNA2D1P54289 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CACNA2D1P54289 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.93■□□□□ 0.3
CACNA2D1P54289 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.93■□□□□ 0.3
CACNA2D1P54289 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.93■□□□□ 0.3
CACNA2D1P54289 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.93■□□□□ 0.3
CACNA2D1P54289 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.93■□□□□ 0.3
CACNA2D1P54289 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.93■□□□□ 0.3
CACNA2D1P54289 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNA2D1P54289 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CACNA2D1P54289 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 HAUS4P1-201ENST00000406739 1145 ntBASIC16.92■□□□□ 0.3
CACNA2D1P54289 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 FAM207CP-201ENST00000443486 507 ntBASIC16.92■□□□□ 0.3
CACNA2D1P54289 EEF1DP4-201ENST00000446006 880 ntBASIC16.92■□□□□ 0.3
CACNA2D1P54289 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 ZNF890P-202ENST00000530367 1156 ntBASIC16.92■□□□□ 0.3
CACNA2D1P54289 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.92■□□□□ 0.3
CACNA2D1P54289 AL109936.8-201ENST00000641772 604 ntBASIC16.92■□□□□ 0.3
CACNA2D1P54289 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.92■□□□□ 0.3
CACNA2D1P54289 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms