Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMGA2P52926 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMGA2P52926 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.57□□□□□ -0.08
HMGA2P52926 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGA2P52926 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGA2P52926 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGA2P52926 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGA2P52926 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 MIR1224-201ENST00000408193 85 ntBASIC14.57□□□□□ -0.08
HMGA2P52926 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGA2P52926 EEF1DP4-201ENST00000446006 880 ntBASIC14.57□□□□□ -0.08
HMGA2P52926 PHKG1P2-201ENST00000457537 863 ntBASIC14.57□□□□□ -0.08
HMGA2P52926 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGA2P52926 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.57□□□□□ -0.08
HMGA2P52926 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGA2P52926 AL450472.2-201ENST00000603663 1156 ntBASIC14.57□□□□□ -0.08
HMGA2P52926 AL691432.3-201ENST00000621860 400 ntBASIC14.57□□□□□ -0.08
HMGA2P52926 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGA2P52926 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGA2P52926 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGA2P52926 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGA2P52926 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.57□□□□□ -0.08
HMGA2P52926 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 LINC00528-201ENST00000600723 2160 ntBASIC14.57□□□□□ -0.08
HMGA2P52926 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGA2P52926 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGA2P52926 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGA2P52926 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
HMGA2P52926 ZBED1P1-201ENST00000502364 1930 ntBASIC14.56□□□□□ -0.08
HMGA2P52926 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
HMGA2P52926 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGA2P52926 AC023024.2-201ENST00000623561 1993 ntBASIC14.56□□□□□ -0.08
HMGA2P52926 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
HMGA2P52926 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGA2P52926 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGA2P52926 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 AC005089.1-201ENST00000619486 2241 ntBASIC14.56□□□□□ -0.08
HMGA2P52926 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HMGA2P52926 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 AC079781.3-201ENST00000449110 356 ntBASIC14.56□□□□□ -0.08
HMGA2P52926 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.56□□□□□ -0.08
HMGA2P52926 RNA5SP419-201ENST00000515908 135 ntBASIC14.56□□□□□ -0.08
HMGA2P52926 AC105233.2-201ENST00000523697 349 ntBASIC14.56□□□□□ -0.08
HMGA2P52926 AF228730.5-201ENST00000530288 346 ntBASIC14.56□□□□□ -0.08
HMGA2P52926 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.56□□□□□ -0.08
HMGA2P52926 KRT19P2-202ENST00000557173 1012 ntBASIC14.56□□□□□ -0.08
HMGA2P52926 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGA2P52926 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGA2P52926 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGA2P52926 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HMGA2P52926 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGA2P52926 AC007191.1-201ENST00000623179 2995 ntBASIC14.56□□□□□ -0.08
HMGA2P52926 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HMGA2P52926 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGA2P52926 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGA2P52926 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGA2P52926 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HMGA2P52926 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.55□□□□□ -0.08
HMGA2P52926 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.55□□□□□ -0.08
HMGA2P52926 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms