Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BRCC3P46736 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.91■□□□□ 0.3
BRCC3P46736 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BRCC3P46736 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.91■□□□□ 0.3
BRCC3P46736 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.91■□□□□ 0.3
BRCC3P46736 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCC3P46736 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCC3P46736 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BRCC3P46736 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCC3P46736 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.9■□□□□ 0.3
BRCC3P46736 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 TTTY23B-201ENST00000442790 549 ntBASIC16.9■□□□□ 0.3
BRCC3P46736 FAM86LP-201ENST00000478302 853 ntBASIC16.9■□□□□ 0.3
BRCC3P46736 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.9■□□□□ 0.3
BRCC3P46736 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.9■□□□□ 0.3
BRCC3P46736 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCC3P46736 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.9■□□□□ 0.3
BRCC3P46736 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.9■□□□□ 0.3
BRCC3P46736 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BRCC3P46736 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCC3P46736 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCC3P46736 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCC3P46736 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BRCC3P46736 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRCC3P46736 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.89■□□□□ 0.3
BRCC3P46736 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
BRCC3P46736 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
BRCC3P46736 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
BRCC3P46736 MTHFR-217ENST00000641820 1569 ntBASIC16.89■□□□□ 0.3
BRCC3P46736 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.89■□□□□ 0.29
BRCC3P46736 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.89■□□□□ 0.29
BRCC3P46736 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
BRCC3P46736 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
BRCC3P46736 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 ARSEP1-201ENST00000420443 635 ntBASIC16.89■□□□□ 0.29
BRCC3P46736 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.89■□□□□ 0.29
BRCC3P46736 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.89■□□□□ 0.29
BRCC3P46736 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.89■□□□□ 0.29
BRCC3P46736 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.89■□□□□ 0.29
BRCC3P46736 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.89■□□□□ 0.29
BRCC3P46736 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.89■□□□□ 0.29
BRCC3P46736 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
BRCC3P46736 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.89■□□□□ 0.29
BRCC3P46736 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.89■□□□□ 0.29
BRCC3P46736 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCC3P46736 AC006449.5-201ENST00000610658 2098 ntBASIC16.89■□□□□ 0.29
BRCC3P46736 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.88■□□□□ 0.29
BRCC3P46736 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCC3P46736 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
BRCC3P46736 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.88■□□□□ 0.29
BRCC3P46736 CROCCP1-201ENST00000426910 5675 ntBASIC16.88■□□□□ 0.29
BRCC3P46736 LINC02199-201ENST00000506655 2702 ntBASIC16.88■□□□□ 0.29
BRCC3P46736 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BRCC3P46736 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BRCC3P46736 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
BRCC3P46736 AC079776.1-201ENST00000401540 1152 ntBASIC16.88■□□□□ 0.29
BRCC3P46736 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.88■□□□□ 0.29
BRCC3P46736 AC112492.5-201ENST00000421897 457 ntBASIC16.88■□□□□ 0.29
BRCC3P46736 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.88■□□□□ 0.29
BRCC3P46736 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.88■□□□□ 0.29
BRCC3P46736 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.88■□□□□ 0.29
BRCC3P46736 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.88■□□□□ 0.29
BRCC3P46736 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms