Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 KRT18P3-201ENST00000451602 1288 ntBASIC17.09■□□□□ 0.33
SSR1P43307 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
SSR1P43307 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.09■□□□□ 0.33
SSR1P43307 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
SSR1P43307 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSR1P43307 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.09■□□□□ 0.33
SSR1P43307 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 AC140113.2-201ENST00000604370 208 ntBASIC17.09■□□□□ 0.33
SSR1P43307 AC027601.4-201ENST00000611259 610 ntBASIC17.09■□□□□ 0.33
SSR1P43307 AL161645.1-201ENST00000622716 1255 ntBASIC17.09■□□□□ 0.33
SSR1P43307 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.09■□□□□ 0.33
SSR1P43307 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.09■□□□□ 0.33
SSR1P43307 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSR1P43307 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 AC069224.1-201ENST00000566372 1715 ntBASIC17.09■□□□□ 0.33
SSR1P43307 AC073439.1-201ENST00000624121 1774 ntBASIC17.09■□□□□ 0.33
SSR1P43307 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 AC112504.1-201ENST00000623415 1841 ntBASIC17.09■□□□□ 0.33
SSR1P43307 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSR1P43307 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSR1P43307 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 SBF1P1-201ENST00000444527 5631 ntBASIC17.08■□□□□ 0.33
SSR1P43307 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SSR1P43307 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SSR1P43307 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SSR1P43307 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSR1P43307 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.08■□□□□ 0.33
SSR1P43307 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSR1P43307 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.08■□□□□ 0.32
SSR1P43307 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSR1P43307 WASH6P-202ENST00000359512 1437 ntBASIC17.08■□□□□ 0.32
SSR1P43307 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SSR1P43307 PMS2P7-201ENST00000506558 1336 ntBASIC17.08■□□□□ 0.32
SSR1P43307 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR1P43307 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSR1P43307 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.08■□□□□ 0.32
SSR1P43307 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSR1P43307 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.08■□□□□ 0.32
SSR1P43307 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.08■□□□□ 0.32
SSR1P43307 PDPK2P-202ENST00000562415 1191 ntBASIC17.08■□□□□ 0.32
SSR1P43307 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.08■□□□□ 0.32
SSR1P43307 BX640515.1-201ENST00000617215 977 ntBASIC17.08■□□□□ 0.32
SSR1P43307 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SSR1P43307 AC092865.6-201ENST00000642101 219 ntBASIC17.08■□□□□ 0.32
SSR1P43307 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR1P43307 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR1P43307 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SSR1P43307 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR1P43307 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSR1P43307 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSR1P43307 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR1P43307 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.08■□□□□ 0.32
SSR1P43307 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR1P43307 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SSR1P43307 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.07■□□□□ 0.32
SSR1P43307 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR1P43307 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.07■□□□□ 0.32
SSR1P43307 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.07■□□□□ 0.32
SSR1P43307 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SSR1P43307 OR2I1P-210ENST00000642037 4691 ntBASIC17.07■□□□□ 0.32
SSR1P43307 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
SSR1P43307 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR1P43307 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SSR1P43307 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SSR1P43307 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SSR1P43307 AC002056.1-201ENST00000395613 760 ntBASIC17.07■□□□□ 0.32
SSR1P43307 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 AC026396.1-201ENST00000419388 421 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms