Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.21■□□□□ 0.19
HADHAP40939 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.21■□□□□ 0.19
HADHAP40939 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.21■□□□□ 0.19
HADHAP40939 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.21■□□□□ 0.19
HADHAP40939 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
HADHAP40939 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.21■□□□□ 0.19
HADHAP40939 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.21■□□□□ 0.19
HADHAP40939 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.21■□□□□ 0.18
HADHAP40939 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HADHAP40939 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
HADHAP40939 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HADHAP40939 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
HADHAP40939 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHAP40939 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HADHAP40939 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.2■□□□□ 0.18
HADHAP40939 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HADHAP40939 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 TSPY26P-202ENST00000565928 3884 ntBASIC16.2■□□□□ 0.18
HADHAP40939 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HADHAP40939 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.2■□□□□ 0.18
HADHAP40939 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHAP40939 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 AL627223.1-201ENST00000416693 442 ntBASIC16.2■□□□□ 0.18
HADHAP40939 KRT18P32-201ENST00000424695 1287 ntBASIC16.2■□□□□ 0.18
HADHAP40939 AP006288.1-201ENST00000446065 395 ntBASIC16.2■□□□□ 0.18
HADHAP40939 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HADHAP40939 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHAP40939 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.2■□□□□ 0.18
HADHAP40939 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.2■□□□□ 0.18
HADHAP40939 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.2■□□□□ 0.18
HADHAP40939 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
HADHAP40939 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.2■□□□□ 0.18
HADHAP40939 AP001160.2-201ENST00000596071 487 ntBASIC16.2■□□□□ 0.18
HADHAP40939 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHAP40939 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHAP40939 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHAP40939 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HADHAP40939 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHAP40939 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHAP40939 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHAP40939 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHAP40939 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.19■□□□□ 0.18
HADHAP40939 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.19■□□□□ 0.18
HADHAP40939 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.19■□□□□ 0.18
HADHAP40939 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.19■□□□□ 0.18
HADHAP40939 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.19■□□□□ 0.18
HADHAP40939 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.19■□□□□ 0.18
HADHAP40939 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.19■□□□□ 0.18
HADHAP40939 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HADHAP40939 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
HADHAP40939 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.19■□□□□ 0.18
HADHAP40939 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.19■□□□□ 0.18
HADHAP40939 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.19■□□□□ 0.18
HADHAP40939 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HADHAP40939 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HADHAP40939 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HADHAP40939 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HADHAP40939 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HADHAP40939 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HADHAP40939 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HADHAP40939 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HADHAP40939 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.18■□□□□ 0.18
HADHAP40939 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HADHAP40939 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms