Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
COL15A1P39059 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL15A1P39059 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20■□□□□ 0.79
COL15A1P39059 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20■□□□□ 0.79
COL15A1P39059 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC20■□□□□ 0.79
COL15A1P39059 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20■□□□□ 0.79
COL15A1P39059 AC026410.3-201ENST00000514280 936 ntBASIC20■□□□□ 0.79
COL15A1P39059 RPL8-205ENST00000527914 551 ntTSL 3 BASIC20■□□□□ 0.79
COL15A1P39059 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
COL15A1P39059 RN7SL560P-201ENST00000577943 264 ntBASIC20■□□□□ 0.79
COL15A1P39059 AC103810.3-201ENST00000583567 96 ntBASIC20■□□□□ 0.79
COL15A1P39059 AC107373.2-201ENST00000607735 490 ntBASIC20■□□□□ 0.79
COL15A1P39059 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20■□□□□ 0.79
COL15A1P39059 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20■□□□□ 0.79
COL15A1P39059 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20■□□□□ 0.79
COL15A1P39059 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
COL15A1P39059 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL15A1P39059 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20■□□□□ 0.79
COL15A1P39059 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20■□□□□ 0.79
COL15A1P39059 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20■□□□□ 0.79
COL15A1P39059 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
COL15A1P39059 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
COL15A1P39059 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
COL15A1P39059 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 FAM86HP-204ENST00000513466 959 ntBASIC19.99■□□□□ 0.79
COL15A1P39059 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.99■□□□□ 0.79
COL15A1P39059 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.99■□□□□ 0.79
COL15A1P39059 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.99■□□□□ 0.79
COL15A1P39059 AC008687.7-202ENST00000637404 953 ntBASIC19.99■□□□□ 0.79
COL15A1P39059 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL15A1P39059 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.99■□□□□ 0.79
COL15A1P39059 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.99■□□□□ 0.79
COL15A1P39059 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
COL15A1P39059 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
COL15A1P39059 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL15A1P39059 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
COL15A1P39059 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL15A1P39059 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL15A1P39059 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.98■□□□□ 0.79
COL15A1P39059 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL15A1P39059 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL15A1P39059 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL15A1P39059 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
COL15A1P39059 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.98■□□□□ 0.79
COL15A1P39059 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.98■□□□□ 0.79
COL15A1P39059 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL15A1P39059 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.98■□□□□ 0.79
COL15A1P39059 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.98■□□□□ 0.79
COL15A1P39059 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.98■□□□□ 0.79
COL15A1P39059 C2orf69P2-201ENST00000562032 1123 ntBASIC19.98■□□□□ 0.79
COL15A1P39059 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.98■□□□□ 0.79
COL15A1P39059 AL139099.5-201ENST00000635274 300 ntBASIC19.98■□□□□ 0.79
COL15A1P39059 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.98■□□□□ 0.79
COL15A1P39059 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL15A1P39059 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL15A1P39059 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.98■□□□□ 0.79
COL15A1P39059 CYP2T1P-202ENST00000641596 2535 ntBASIC19.98■□□□□ 0.79
COL15A1P39059 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
COL15A1P39059 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.98■□□□□ 0.79
COL15A1P39059 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.98■□□□□ 0.79
COL15A1P39059 AC011477.6-201ENST00000604980 1927 ntBASIC19.98■□□□□ 0.79
COL15A1P39059 DRD5P1-201ENST00000456605 1438 ntBASIC19.98■□□□□ 0.79
COL15A1P39059 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL15A1P39059 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
COL15A1P39059 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL15A1P39059 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL15A1P39059 AL596087.1-201ENST00000400979 1969 ntBASIC19.98■□□□□ 0.79
COL15A1P39059 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL15A1P39059 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms