Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 AC136604.1-201ENST00000418535 575 ntBASIC13.73□□□□□ -0.21
CCL1P22362 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL1P22362 TIMM8BP1-201ENST00000452384 211 ntBASIC13.73□□□□□ -0.21
CCL1P22362 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.73□□□□□ -0.21
CCL1P22362 SLC25A39P2-201ENST00000537614 270 ntBASIC13.73□□□□□ -0.21
CCL1P22362 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL1P22362 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CCL1P22362 RARRES2P9-201ENST00000565168 469 ntBASIC13.73□□□□□ -0.21
CCL1P22362 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL1P22362 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.73□□□□□ -0.21
CCL1P22362 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.73□□□□□ -0.21
CCL1P22362 AC055717.3-201ENST00000622967 595 ntBASIC13.73□□□□□ -0.21
CCL1P22362 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CCL1P22362 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCL1P22362 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL1P22362 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
CCL1P22362 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL1P22362 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL1P22362 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCL1P22362 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CCL1P22362 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL1P22362 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL1P22362 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL1P22362 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCL1P22362 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CCL1P22362 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL1P22362 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CCL1P22362 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.72□□□□□ -0.21
CCL1P22362 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.72□□□□□ -0.21
CCL1P22362 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.72□□□□□ -0.21
CCL1P22362 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.72□□□□□ -0.21
CCL1P22362 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL1P22362 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.72□□□□□ -0.21
CCL1P22362 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL1P22362 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CCL1P22362 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL1P22362 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL1P22362 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL1P22362 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CCL1P22362 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL1P22362 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL1P22362 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL1P22362 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCL1P22362 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL1P22362 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL1P22362 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCL1P22362 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL1P22362 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
CCL1P22362 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL1P22362 AC023824.1-201ENST00000562945 2975 ntBASIC13.71□□□□□ -0.21
CCL1P22362 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL1P22362 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL1P22362 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms