Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 AP001005.1-201ENST00000571755 1248 ntBASIC14.89□□□□□ -0.03
TNFRSF1BP20333 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 AC007064.4-201ENST00000637740 555 ntBASIC14.89□□□□□ -0.03
TNFRSF1BP20333 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 CICP24-201ENST00000605464 2705 ntBASIC14.89□□□□□ -0.03
TNFRSF1BP20333 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 AC106881.1-201ENST00000605849 3329 ntBASIC14.89□□□□□ -0.03
TNFRSF1BP20333 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 C18orf15-201ENST00000623680 2534 ntBASIC14.88□□□□□ -0.03
TNFRSF1BP20333 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 AC112693.3-201ENST00000624819 1983 ntBASIC14.88□□□□□ -0.03
TNFRSF1BP20333 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 Z83851.2-201ENST00000609564 659 ntBASIC14.88□□□□□ -0.03
TNFRSF1BP20333 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 AP001282.1-201ENST00000531301 1499 ntBASIC14.88□□□□□ -0.03
TNFRSF1BP20333 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF1BP20333 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 AC068587.6-202ENST00000641839 5619 ntBASIC14.87□□□□□ -0.03
TNFRSF1BP20333 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFRSF1BP20333 AC007967.2-201ENST00000432613 625 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms