Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MIR4453-201ENST00000584019 89 ntBASIC16.13■□□□□ 0.17
HLA-DPA1P20036 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 RN7SL828P-201ENST00000607615 303 ntBASIC16.13■□□□□ 0.17
HLA-DPA1P20036 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 SPDYE17-201ENST00000412399 783 ntBASIC16.12■□□□□ 0.17
HLA-DPA1P20036 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.12■□□□□ 0.17
HLA-DPA1P20036 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DPA1P20036 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 AL139400.1-201ENST00000366220 510 ntBASIC16.11■□□□□ 0.17
HLA-DPA1P20036 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.11■□□□□ 0.17
HLA-DPA1P20036 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 CNN2P2-201ENST00000443536 909 ntBASIC16.11■□□□□ 0.17
HLA-DPA1P20036 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 CNN2P3-201ENST00000450201 906 ntBASIC16.11■□□□□ 0.17
HLA-DPA1P20036 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 AC109322.1-201ENST00000524499 1264 ntBASIC16.11■□□□□ 0.17
HLA-DPA1P20036 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 AC025678.2-201ENST00000562061 970 ntBASIC16.11■□□□□ 0.17
HLA-DPA1P20036 AL450472.2-201ENST00000603663 1156 ntBASIC16.11■□□□□ 0.17
HLA-DPA1P20036 AL133215.2-201ENST00000609242 977 ntBASIC16.11■□□□□ 0.17
HLA-DPA1P20036 AL136317.3-201ENST00000618497 906 ntBASIC16.11■□□□□ 0.17
HLA-DPA1P20036 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DPA1P20036 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms