Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PRAL-201ENST00000624952 3286 ntBASIC15.98■□□□□ 0.15
XRCC1P18887 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
XRCC1P18887 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.98■□□□□ 0.15
XRCC1P18887 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
XRCC1P18887 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.98■□□□□ 0.15
XRCC1P18887 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.98■□□□□ 0.15
XRCC1P18887 DUX4L27-201ENST00000554796 1261 ntBASIC15.98■□□□□ 0.15
XRCC1P18887 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
XRCC1P18887 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.98■□□□□ 0.15
XRCC1P18887 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
XRCC1P18887 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
XRCC1P18887 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
XRCC1P18887 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC1P18887 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
XRCC1P18887 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
XRCC1P18887 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC1P18887 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC1P18887 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC1P18887 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.97■□□□□ 0.15
XRCC1P18887 PPT1-215ENST00000641471 2368 ntBASIC15.97■□□□□ 0.15
XRCC1P18887 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC1P18887 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC1P18887 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 AC107890.1-201ENST00000422478 521 ntBASIC15.97■□□□□ 0.15
XRCC1P18887 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.97■□□□□ 0.15
XRCC1P18887 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC1P18887 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.97■□□□□ 0.15
XRCC1P18887 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.97■□□□□ 0.15
XRCC1P18887 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC1P18887 MIR4453-201ENST00000584019 89 ntBASIC15.97■□□□□ 0.15
XRCC1P18887 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.97■□□□□ 0.15
XRCC1P18887 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC1P18887 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.97■□□□□ 0.15
XRCC1P18887 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
XRCC1P18887 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.97■□□□□ 0.15
XRCC1P18887 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC1P18887 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC1P18887 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
XRCC1P18887 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
XRCC1P18887 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC1P18887 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC1P18887 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.97■□□□□ 0.15
XRCC1P18887 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
XRCC1P18887 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
XRCC1P18887 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.96■□□□□ 0.15
XRCC1P18887 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.96■□□□□ 0.15
XRCC1P18887 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.96■□□□□ 0.15
XRCC1P18887 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
XRCC1P18887 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
XRCC1P18887 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
XRCC1P18887 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
XRCC1P18887 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.96■□□□□ 0.15
XRCC1P18887 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.96■□□□□ 0.15
XRCC1P18887 AC055876.3-201ENST00000431496 288 ntBASIC15.96■□□□□ 0.15
XRCC1P18887 AC125807.1-201ENST00000483097 614 ntBASIC15.96■□□□□ 0.15
XRCC1P18887 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.96■□□□□ 0.15
XRCC1P18887 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.96■□□□□ 0.15
XRCC1P18887 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.96■□□□□ 0.15
XRCC1P18887 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.96■□□□□ 0.15
XRCC1P18887 AC005498.2-205ENST00000593218 784 ntBASIC15.96■□□□□ 0.15
XRCC1P18887 AC138649.4-201ENST00000612222 287 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms