Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL3L1P16619 FO538757.1-201ENST00000623083 1397 ntBASIC13.2□□□□□ -0.3
CCL3L1P16619 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL3L1P16619 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCL3L1P16619 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL3L1P16619 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL3L1P16619 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCL3L1P16619 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
CCL3L1P16619 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL3L1P16619 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.19□□□□□ -0.3
CCL3L1P16619 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCL3L1P16619 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCL3L1P16619 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL3L1P16619 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CCL3L1P16619 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL3L1P16619 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL3L1P16619 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL3L1P16619 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.19□□□□□ -0.3
CCL3L1P16619 IGHV3-42-201ENST00000520410 361 ntBASIC13.19□□□□□ -0.3
CCL3L1P16619 RFPL4AP1-201ENST00000530883 850 ntBASIC13.19□□□□□ -0.3
CCL3L1P16619 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL3L1P16619 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL3L1P16619 AC073592.8-201ENST00000624126 511 ntBASIC13.19□□□□□ -0.3
CCL3L1P16619 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL3L1P16619 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL3L1P16619 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 REXO1L1P-202ENST00000608646 1974 ntBASIC13.19□□□□□ -0.3
CCL3L1P16619 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 AC007950.2-201ENST00000615045 2347 ntBASIC13.19□□□□□ -0.3
CCL3L1P16619 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCL3L1P16619 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL3L1P16619 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL3L1P16619 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL3L1P16619 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCL3L1P16619 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL3L1P16619 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL3L1P16619 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL3L1P16619 AC011477.6-201ENST00000604980 1927 ntBASIC13.18□□□□□ -0.3
CCL3L1P16619 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL3L1P16619 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCL3L1P16619 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CCL3L1P16619 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCL3L1P16619 RPL37AP1-201ENST00000412502 279 ntBASIC13.18□□□□□ -0.3
CCL3L1P16619 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL3L1P16619 AC027369.6-201ENST00000525520 931 ntBASIC13.18□□□□□ -0.3
CCL3L1P16619 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL3L1P16619 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 AL138828.2-201ENST00000615812 383 ntBASIC13.18□□□□□ -0.3
CCL3L1P16619 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL3L1P16619 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCL3L1P16619 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCL3L1P16619 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL3L1P16619 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL3L1P16619 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
CCL3L1P16619 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3L1P16619 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCL3L1P16619 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms