Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFRAP16234 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFRAP16234 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFRAP16234 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.77■□□□□ 0.28
PDGFRAP16234 AC125807.1-201ENST00000483097 614 ntBASIC16.77■□□□□ 0.28
PDGFRAP16234 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.77■□□□□ 0.28
PDGFRAP16234 DUX4L27-201ENST00000554796 1261 ntBASIC16.77■□□□□ 0.28
PDGFRAP16234 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFRAP16234 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFRAP16234 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFRAP16234 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFRAP16234 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.77■□□□□ 0.27
PDGFRAP16234 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFRAP16234 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFRAP16234 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.77■□□□□ 0.27
PDGFRAP16234 KRT8P37-201ENST00000451609 1420 ntBASIC16.77■□□□□ 0.27
PDGFRAP16234 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFRAP16234 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PDGFRAP16234 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.77■□□□□ 0.27
PDGFRAP16234 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFRAP16234 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFRAP16234 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFRAP16234 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFRAP16234 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PDGFRAP16234 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFRAP16234 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PDGFRAP16234 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFRAP16234 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PDGFRAP16234 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.76■□□□□ 0.27
PDGFRAP16234 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.76■□□□□ 0.27
PDGFRAP16234 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.76■□□□□ 0.27
PDGFRAP16234 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 HMGN1P19-201ENST00000436976 333 ntBASIC16.76■□□□□ 0.27
PDGFRAP16234 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.76■□□□□ 0.27
PDGFRAP16234 KLF2P3-201ENST00000451977 1087 ntBASIC16.76■□□□□ 0.27
PDGFRAP16234 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.76■□□□□ 0.27
PDGFRAP16234 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFRAP16234 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.76■□□□□ 0.27
PDGFRAP16234 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFRAP16234 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.76■□□□□ 0.27
PDGFRAP16234 AC051619.7-201ENST00000568314 623 ntBASIC16.76■□□□□ 0.27
PDGFRAP16234 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.76■□□□□ 0.27
PDGFRAP16234 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
PDGFRAP16234 RN7SL828P-201ENST00000607615 303 ntBASIC16.76■□□□□ 0.27
PDGFRAP16234 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.76■□□□□ 0.27
PDGFRAP16234 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDGFRAP16234 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDGFRAP16234 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDGFRAP16234 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFRAP16234 AL035456.1-201ENST00000456064 1369 ntBASIC16.76■□□□□ 0.27
PDGFRAP16234 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.76■□□□□ 0.27
PDGFRAP16234 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PDGFRAP16234 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.75■□□□□ 0.27
PDGFRAP16234 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PDGFRAP16234 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.75■□□□□ 0.27
PDGFRAP16234 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PDGFRAP16234 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PDGFRAP16234 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.75■□□□□ 0.27
PDGFRAP16234 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.75■□□□□ 0.27
PDGFRAP16234 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.75■□□□□ 0.27
PDGFRAP16234 MTND6P24-201ENST00000440466 518 ntBASIC16.75■□□□□ 0.27
PDGFRAP16234 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.75■□□□□ 0.27
PDGFRAP16234 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PDGFRAP16234 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.75■□□□□ 0.27
PDGFRAP16234 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
PDGFRAP16234 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.75■□□□□ 0.27
PDGFRAP16234 AL133215.2-201ENST00000609242 977 ntBASIC16.75■□□□□ 0.27
PDGFRAP16234 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms