Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.08□□□□□ -0.32
DEFA4P12838 AC021097.1-201ENST00000607902 574 ntBASIC13.08□□□□□ -0.32
DEFA4P12838 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.08□□□□□ -0.32
DEFA4P12838 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.08□□□□□ -0.32
DEFA4P12838 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DEFA4P12838 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.08□□□□□ -0.32
DEFA4P12838 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DEFA4P12838 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DEFA4P12838 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DEFA4P12838 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DEFA4P12838 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DEFA4P12838 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DEFA4P12838 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.08□□□□□ -0.32
DEFA4P12838 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
DEFA4P12838 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DEFA4P12838 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
DEFA4P12838 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
DEFA4P12838 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.08□□□□□ -0.32
DEFA4P12838 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
DEFA4P12838 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
DEFA4P12838 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
DEFA4P12838 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
DEFA4P12838 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.08□□□□□ -0.32
DEFA4P12838 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 LINC02447-202ENST00000501888 2146 ntBASIC13.07□□□□□ -0.32
DEFA4P12838 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
DEFA4P12838 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.07□□□□□ -0.32
DEFA4P12838 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.07□□□□□ -0.32
DEFA4P12838 UNC93B6-202ENST00000528242 690 ntBASIC13.07□□□□□ -0.32
DEFA4P12838 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 AC104692.2-201ENST00000603054 253 ntBASIC13.07□□□□□ -0.32
DEFA4P12838 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 MIR7706-201ENST00000613747 67 ntBASIC13.07□□□□□ -0.32
DEFA4P12838 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 CDC14C-201ENST00000428251 1719 ntBASIC13.07□□□□□ -0.32
DEFA4P12838 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DEFA4P12838 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
DEFA4P12838 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.07□□□□□ -0.32
DEFA4P12838 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.07□□□□□ -0.32
DEFA4P12838 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
DEFA4P12838 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.06□□□□□ -0.32
DEFA4P12838 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DEFA4P12838 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
DEFA4P12838 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DEFA4P12838 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
DEFA4P12838 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.06□□□□□ -0.32
DEFA4P12838 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
DEFA4P12838 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.06□□□□□ -0.32
DEFA4P12838 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.06□□□□□ -0.32
DEFA4P12838 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.06□□□□□ -0.32
DEFA4P12838 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
DEFA4P12838 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DEFA4P12838 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
DEFA4P12838 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DEFA4P12838 SNX18-202ENST00000343017 3140 ntBASIC13.06□□□□□ -0.32
DEFA4P12838 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.06□□□□□ -0.32
DEFA4P12838 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DEFA4P12838 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DEFA4P12838 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.06□□□□□ -0.32
DEFA4P12838 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.06□□□□□ -0.32
DEFA4P12838 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.06□□□□□ -0.32
DEFA4P12838 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms