Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AC013726.1-201ENST00000563747 2285 ntBASIC15.55■□□□□ 0.08
LINGO3P0C6S8 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 RPS15P9-201ENST00000494093 319 ntBASIC15.54■□□□□ 0.08
LINGO3P0C6S8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 MIR1199-201ENST00000621445 119 ntBASIC15.54■□□□□ 0.08
LINGO3P0C6S8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.54■□□□□ 0.08
LINGO3P0C6S8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.54■□□□□ 0.08
LINGO3P0C6S8 AC099521.3-201ENST00000624251 2938 ntBASIC15.54■□□□□ 0.08
LINGO3P0C6S8 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 AC027612.1-201ENST00000445234 2395 ntBASIC15.53■□□□□ 0.08
LINGO3P0C6S8 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 PAWRP1-201ENST00000451083 565 ntBASIC15.53■□□□□ 0.08
LINGO3P0C6S8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 AC093909.1-201ENST00000504731 1122 ntBASIC15.53■□□□□ 0.08
LINGO3P0C6S8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 AC116407.3-201ENST00000623905 1129 ntBASIC15.53■□□□□ 0.08
LINGO3P0C6S8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 PGM5P2-202ENST00000637225 1043 ntBASIC15.53■□□□□ 0.08
LINGO3P0C6S8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms