Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 TOMM22P5-201ENST00000416399 439 ntBASIC14.48□□□□□ -0.09
FREM3P0C091 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
FREM3P0C091 HLA-V-204ENST00000476601 1289 ntBASIC14.48□□□□□ -0.09
FREM3P0C091 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.48□□□□□ -0.09
FREM3P0C091 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.48□□□□□ -0.09
FREM3P0C091 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.48□□□□□ -0.09
FREM3P0C091 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
FREM3P0C091 AF228730.6-201ENST00000641497 218 ntBASIC14.48□□□□□ -0.09
FREM3P0C091 AC084121.3-201ENST00000641716 218 ntBASIC14.48□□□□□ -0.09
FREM3P0C091 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
FREM3P0C091 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.48□□□□□ -0.09
FREM3P0C091 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
FREM3P0C091 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.48□□□□□ -0.09
FREM3P0C091 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
FREM3P0C091 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
FREM3P0C091 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
FREM3P0C091 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
FREM3P0C091 AC112504.1-201ENST00000623415 1841 ntBASIC14.48□□□□□ -0.09
FREM3P0C091 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.48□□□□□ -0.09
FREM3P0C091 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.48□□□□□ -0.09
FREM3P0C091 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.48□□□□□ -0.09
FREM3P0C091 AC015922.1-201ENST00000421102 1152 ntBASIC14.48□□□□□ -0.09
FREM3P0C091 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.48□□□□□ -0.09
FREM3P0C091 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.48□□□□□ -0.09
FREM3P0C091 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.48□□□□□ -0.09
FREM3P0C091 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.48□□□□□ -0.09
FREM3P0C091 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
FREM3P0C091 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.48□□□□□ -0.09
FREM3P0C091 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
FREM3P0C091 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FREM3P0C091 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.48□□□□□ -0.09
FREM3P0C091 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
FREM3P0C091 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.47□□□□□ -0.09
FREM3P0C091 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.47□□□□□ -0.09
FREM3P0C091 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
FREM3P0C091 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.47□□□□□ -0.09
FREM3P0C091 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
FREM3P0C091 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.47□□□□□ -0.09
FREM3P0C091 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.47□□□□□ -0.09
FREM3P0C091 AC135586.1-201ENST00000539323 574 ntBASIC14.47□□□□□ -0.09
FREM3P0C091 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.47□□□□□ -0.09
FREM3P0C091 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
FREM3P0C091 AL035252.4-201ENST00000624174 288 ntBASIC14.47□□□□□ -0.09
FREM3P0C091 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.47□□□□□ -0.09
FREM3P0C091 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
FREM3P0C091 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
FREM3P0C091 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
FREM3P0C091 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.47□□□□□ -0.09
FREM3P0C091 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.47□□□□□ -0.09
FREM3P0C091 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
FREM3P0C091 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.47□□□□□ -0.09
FREM3P0C091 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
FREM3P0C091 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
FREM3P0C091 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
FREM3P0C091 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
FREM3P0C091 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.47□□□□□ -0.09
FREM3P0C091 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.47□□□□□ -0.09
FREM3P0C091 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.47□□□□□ -0.09
FREM3P0C091 AL589987.1-201ENST00000453380 819 ntBASIC14.47□□□□□ -0.09
FREM3P0C091 MEIS3P1-201ENST00000495167 958 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms