Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
THBS1P07996 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.72□□□□□ -0.05
THBS1P07996 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.72□□□□□ -0.05
THBS1P07996 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 RARRES2P9-201ENST00000565168 469 ntBASIC14.72□□□□□ -0.05
THBS1P07996 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.72□□□□□ -0.05
THBS1P07996 MIR4469-201ENST00000583919 79 ntBASIC14.72□□□□□ -0.05
THBS1P07996 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.72□□□□□ -0.05
THBS1P07996 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.72□□□□□ -0.05
THBS1P07996 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
THBS1P07996 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
THBS1P07996 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 KRT8P37-201ENST00000451609 1420 ntBASIC14.72□□□□□ -0.05
THBS1P07996 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.72□□□□□ -0.05
THBS1P07996 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
THBS1P07996 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
THBS1P07996 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
THBS1P07996 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.71□□□□□ -0.05
THBS1P07996 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.71□□□□□ -0.05
THBS1P07996 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.71□□□□□ -0.05
THBS1P07996 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
THBS1P07996 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.71□□□□□ -0.05
THBS1P07996 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
THBS1P07996 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
THBS1P07996 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
THBS1P07996 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.71□□□□□ -0.05
THBS1P07996 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
THBS1P07996 AL450472.2-201ENST00000603663 1156 ntBASIC14.71□□□□□ -0.05
THBS1P07996 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
THBS1P07996 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 AC105339.1-204ENST00000636249 355 ntBASIC14.71□□□□□ -0.05
THBS1P07996 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.71□□□□□ -0.05
THBS1P07996 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
THBS1P07996 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
THBS1P07996 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.71□□□□□ -0.06
THBS1P07996 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
THBS1P07996 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
THBS1P07996 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
THBS1P07996 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.06
THBS1P07996 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
THBS1P07996 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
THBS1P07996 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 AC013268.4-201ENST00000637413 2228 ntBASIC14.7□□□□□ -0.06
THBS1P07996 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 AC136621.1-201ENST00000624017 2304 ntBASIC14.7□□□□□ -0.06
THBS1P07996 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.7□□□□□ -0.06
THBS1P07996 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
THBS1P07996 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
THBS1P07996 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.7□□□□□ -0.06
THBS1P07996 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
THBS1P07996 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC14.7□□□□□ -0.06
THBS1P07996 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms