Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.25□□□□□ -0.13
ERCC1P07992 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.25□□□□□ -0.13
ERCC1P07992 AC022145.2-201ENST00000598203 171 ntBASIC14.25□□□□□ -0.13
ERCC1P07992 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.25□□□□□ -0.13
ERCC1P07992 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.25□□□□□ -0.13
ERCC1P07992 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
ERCC1P07992 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.25□□□□□ -0.13
ERCC1P07992 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.25□□□□□ -0.13
ERCC1P07992 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ERCC1P07992 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.24□□□□□ -0.13
ERCC1P07992 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ERCC1P07992 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ERCC1P07992 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.24□□□□□ -0.13
ERCC1P07992 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ERCC1P07992 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.24□□□□□ -0.13
ERCC1P07992 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.24□□□□□ -0.13
ERCC1P07992 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
ERCC1P07992 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ERCC1P07992 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 AC004461.1-201ENST00000412461 403 ntBASIC14.24□□□□□ -0.13
ERCC1P07992 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ERCC1P07992 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.24□□□□□ -0.13
ERCC1P07992 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.24□□□□□ -0.13
ERCC1P07992 AL592309.1-201ENST00000443127 649 ntBASIC14.24□□□□□ -0.13
ERCC1P07992 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ERCC1P07992 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.24□□□□□ -0.13
ERCC1P07992 AL135744.1-201ENST00000565098 629 ntBASIC14.24□□□□□ -0.13
ERCC1P07992 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.24□□□□□ -0.13
ERCC1P07992 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.24□□□□□ -0.13
ERCC1P07992 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.24□□□□□ -0.13
ERCC1P07992 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.24□□□□□ -0.13
ERCC1P07992 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC1P07992 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.24□□□□□ -0.13
ERCC1P07992 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.24□□□□□ -0.13
ERCC1P07992 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.24□□□□□ -0.13
ERCC1P07992 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ERCC1P07992 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
ERCC1P07992 WASH6P-202ENST00000359512 1437 ntBASIC14.24□□□□□ -0.13
ERCC1P07992 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
ERCC1P07992 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC1P07992 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
ERCC1P07992 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC1P07992 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ERCC1P07992 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC1P07992 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC1P07992 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC1P07992 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.23□□□□□ -0.13
ERCC1P07992 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC1P07992 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC1P07992 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
ERCC1P07992 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC1P07992 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms