Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CTSDP07339 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.32□□□□□ -0.28
CTSDP07339 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.32□□□□□ -0.28
CTSDP07339 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 AL365209.1-201ENST00000624418 6473 ntBASIC13.32□□□□□ -0.28
CTSDP07339 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.31□□□□□ -0.28
CTSDP07339 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CTSDP07339 AC097376.2-205ENST00000610159 5334 ntBASIC13.31□□□□□ -0.28
CTSDP07339 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.31□□□□□ -0.28
CTSDP07339 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.31□□□□□ -0.28
CTSDP07339 HMGA1P7-201ENST00000406908 502 ntBASIC13.31□□□□□ -0.28
CTSDP07339 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.31□□□□□ -0.28
CTSDP07339 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.31□□□□□ -0.28
CTSDP07339 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.31□□□□□ -0.28
CTSDP07339 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.31□□□□□ -0.28
CTSDP07339 KRT18P27-201ENST00000427733 1299 ntBASIC13.31□□□□□ -0.28
CTSDP07339 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CTSDP07339 AC136632.2-201ENST00000512891 861 ntBASIC13.31□□□□□ -0.28
CTSDP07339 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.31□□□□□ -0.28
CTSDP07339 PRELID1P1-202ENST00000567272 903 ntBASIC13.31□□□□□ -0.28
CTSDP07339 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.31□□□□□ -0.28
CTSDP07339 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.31□□□□□ -0.28
CTSDP07339 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CTSDP07339 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CTSDP07339 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CTSDP07339 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
CTSDP07339 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.31□□□□□ -0.28
CTSDP07339 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
CTSDP07339 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CTSDP07339 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSDP07339 AC134407.2-201ENST00000625089 1978 ntBASIC13.31□□□□□ -0.28
CTSDP07339 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSDP07339 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSDP07339 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSDP07339 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
CTSDP07339 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.3□□□□□ -0.28
CTSDP07339 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CTSDP07339 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSDP07339 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CTSDP07339 LINC00528-201ENST00000600723 2160 ntBASIC13.3□□□□□ -0.28
CTSDP07339 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CTSDP07339 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CTSDP07339 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CTSDP07339 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.3□□□□□ -0.28
CTSDP07339 FOSL1P1-201ENST00000511041 816 ntBASIC13.3□□□□□ -0.28
CTSDP07339 IGHV3-65-201ENST00000523210 341 ntBASIC13.3□□□□□ -0.28
CTSDP07339 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.3□□□□□ -0.28
CTSDP07339 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.3□□□□□ -0.28
CTSDP07339 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CTSDP07339 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSDP07339 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CTSDP07339 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CTSDP07339 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSDP07339 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSDP07339 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CTSDP07339 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.3□□□□□ -0.28
CTSDP07339 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.3□□□□□ -0.28
CTSDP07339 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSDP07339 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSDP07339 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CTSDP07339 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CTSDP07339 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.3□□□□□ -0.28
CTSDP07339 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.29□□□□□ -0.28
CTSDP07339 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 AC007191.1-201ENST00000623179 2995 ntBASIC13.29□□□□□ -0.28
CTSDP07339 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms