Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.06■□□□□ 0.16
APOA4P06727 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
APOA4P06727 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APOA4P06727 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.06■□□□□ 0.16
APOA4P06727 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.06■□□□□ 0.16
APOA4P06727 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.06■□□□□ 0.16
APOA4P06727 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.06■□□□□ 0.16
APOA4P06727 AC105339.1-204ENST00000636249 355 ntBASIC16.06■□□□□ 0.16
APOA4P06727 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APOA4P06727 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
APOA4P06727 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.06■□□□□ 0.16
APOA4P06727 AC144831.1-201ENST00000573312 2656 ntBASIC16.06■□□□□ 0.16
APOA4P06727 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APOA4P06727 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
APOA4P06727 SSR4P1-203ENST00000599569 2260 ntBASIC16.06■□□□□ 0.16
APOA4P06727 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APOA4P06727 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APOA4P06727 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APOA4P06727 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.06■□□□□ 0.16
APOA4P06727 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.06■□□□□ 0.16
APOA4P06727 AC023157.3-201ENST00000619086 2088 ntBASIC16.06■□□□□ 0.16
APOA4P06727 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APOA4P06727 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APOA4P06727 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
APOA4P06727 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
APOA4P06727 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.05■□□□□ 0.16
APOA4P06727 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.05■□□□□ 0.16
APOA4P06727 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.05■□□□□ 0.16
APOA4P06727 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.05■□□□□ 0.16
APOA4P06727 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.05■□□□□ 0.16
APOA4P06727 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.05■□□□□ 0.16
APOA4P06727 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.05■□□□□ 0.16
APOA4P06727 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.05■□□□□ 0.16
APOA4P06727 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.05■□□□□ 0.16
APOA4P06727 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.05■□□□□ 0.16
APOA4P06727 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.05■□□□□ 0.16
APOA4P06727 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.05■□□□□ 0.16
APOA4P06727 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.05■□□□□ 0.16
APOA4P06727 AC022145.2-201ENST00000598203 171 ntBASIC16.05■□□□□ 0.16
APOA4P06727 SPTSSB-204ENST00000617024 1292 ntBASIC16.05■□□□□ 0.16
APOA4P06727 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
APOA4P06727 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
APOA4P06727 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.05■□□□□ 0.16
APOA4P06727 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
APOA4P06727 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
APOA4P06727 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
APOA4P06727 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
APOA4P06727 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.05■□□□□ 0.16
APOA4P06727 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
APOA4P06727 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APOA4P06727 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
APOA4P06727 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
APOA4P06727 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 UXT-AS1-201ENST00000590504 1525 ntBASIC16.04■□□□□ 0.16
APOA4P06727 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
APOA4P06727 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 AC005237.2-201ENST00000434368 219 ntBASIC16.04■□□□□ 0.16
APOA4P06727 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.04■□□□□ 0.16
APOA4P06727 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.04■□□□□ 0.16
APOA4P06727 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 AP000344.2-201ENST00000512987 629 ntBASIC16.04■□□□□ 0.16
APOA4P06727 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.04■□□□□ 0.16
APOA4P06727 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.04■□□□□ 0.16
APOA4P06727 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.04■□□□□ 0.16
APOA4P06727 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.04■□□□□ 0.16
APOA4P06727 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APOA4P06727 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
APOA4P06727 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.04■□□□□ 0.16
APOA4P06727 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms