Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 C18orf15-201ENST00000623680 2534 ntBASIC15.14■□□□□ 0.01
MT-ND1P03886 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
MT-ND1P03886 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.14■□□□□ 0.01
MT-ND1P03886 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
MT-ND1P03886 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MT-ND1P03886 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.14■□□□□ 0.01
MT-ND1P03886 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.14■□□□□ 0.01
MT-ND1P03886 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MT-ND1P03886 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.14■□□□□ 0.01
MT-ND1P03886 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.14■□□□□ 0.01
MT-ND1P03886 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
MT-ND1P03886 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.14■□□□□ 0.01
MT-ND1P03886 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MT-ND1P03886 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.14■□□□□ 0.01
MT-ND1P03886 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.14■□□□□ 0.01
MT-ND1P03886 UNC93B7-201ENST00000509439 705 ntBASIC15.14■□□□□ 0.01
MT-ND1P03886 IGHV3-65-201ENST00000523210 341 ntBASIC15.14■□□□□ 0.01
MT-ND1P03886 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.14■□□□□ 0.01
MT-ND1P03886 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.14■□□□□ 0.01
MT-ND1P03886 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.14■□□□□ 0.01
MT-ND1P03886 AC008735.5-201ENST00000623544 497 ntBASIC15.14■□□□□ 0.01
MT-ND1P03886 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
MT-ND1P03886 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
MT-ND1P03886 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.14■□□□□ 0.01
MT-ND1P03886 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.14■□□□□ 0.01
MT-ND1P03886 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.14■□□□□ 0.01
MT-ND1P03886 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MT-ND1P03886 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.14■□□□□ 0.01
MT-ND1P03886 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MT-ND1P03886 AL359258.3-201ENST00000622910 2331 ntBASIC15.14■□□□□ 0.01
MT-ND1P03886 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.13■□□□□ 0.01
MT-ND1P03886 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.13■□□□□ 0.01
MT-ND1P03886 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MT-ND1P03886 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.13■□□□□ 0.01
MT-ND1P03886 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.13■□□□□ 0.01
MT-ND1P03886 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.13■□□□□ 0.01
MT-ND1P03886 AC112693.3-201ENST00000624819 1983 ntBASIC15.13■□□□□ 0.01
MT-ND1P03886 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.13■□□□□ 0.01
MT-ND1P03886 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MT-ND1P03886 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.13■□□□□ 0.01
MT-ND1P03886 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 HAUS4P1-201ENST00000406739 1145 ntBASIC15.13■□□□□ 0.01
MT-ND1P03886 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.13■□□□□ 0.01
MT-ND1P03886 DUSP5P1-201ENST00000441325 1139 ntBASIC15.13■□□□□ 0.01
MT-ND1P03886 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.13■□□□□ 0.01
MT-ND1P03886 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MT-ND1P03886 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.13■□□□□ 0.01
MT-ND1P03886 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.13■□□□□ 0.01
MT-ND1P03886 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.13■□□□□ 0.01
MT-ND1P03886 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.13■□□□□ 0.01
MT-ND1P03886 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MT-ND1P03886 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.13■□□□□ 0.01
MT-ND1P03886 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
MT-ND1P03886 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.13■□□□□ 0.01
MT-ND1P03886 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
MT-ND1P03886 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.13■□□□□ 0.01
MT-ND1P03886 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.13■□□□□ 0.01
MT-ND1P03886 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MT-ND1P03886 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MT-ND1P03886 AC117489.1-201ENST00000625169 3217 ntBASIC15.13■□□□□ 0.01
MT-ND1P03886 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MT-ND1P03886 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.12■□□□□ 0.01
MT-ND1P03886 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.12■□□□□ 0.01
MT-ND1P03886 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
MT-ND1P03886 OR2I1P-210ENST00000642037 4691 ntBASIC15.12■□□□□ 0.01
MT-ND1P03886 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.12■□□□□ 0.01
MT-ND1P03886 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
MT-ND1P03886 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms