Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
USH2AO75445 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.3
USH2AO75445 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC6.95□□□□□ -1.3
USH2AO75445 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 AC023141.7-201ENST00000430646 407 ntBASIC6.95□□□□□ -1.3
USH2AO75445 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC6.95□□□□□ -1.3
USH2AO75445 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC6.95□□□□□ -1.3
USH2AO75445 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC6.95□□□□□ -1.3
USH2AO75445 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC6.95□□□□□ -1.3
USH2AO75445 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 KLF2P2-201ENST00000416807 1039 ntBASIC6.95□□□□□ -1.3
USH2AO75445 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 AC100850.1-201ENST00000506768 649 ntBASIC6.95□□□□□ -1.3
USH2AO75445 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC6.95□□□□□ -1.3
USH2AO75445 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC6.95□□□□□ -1.3
USH2AO75445 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 AC068587.8-201ENST00000641239 219 ntBASIC6.95□□□□□ -1.3
USH2AO75445 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 AL137077.2-201ENST00000635124 1608 ntBASIC6.95□□□□□ -1.3
USH2AO75445 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 AL357563.1-201ENST00000404728 395 ntBASIC6.95□□□□□ -1.3
USH2AO75445 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC6.95□□□□□ -1.3
USH2AO75445 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 EEF1DP4-201ENST00000446006 880 ntBASIC6.95□□□□□ -1.3
USH2AO75445 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC6.95□□□□□ -1.3
USH2AO75445 AC021723.1-201ENST00000486306 515 ntBASIC6.95□□□□□ -1.3
USH2AO75445 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC6.95□□□□□ -1.3
USH2AO75445 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC6.95□□□□□ -1.3
USH2AO75445 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC6.95□□□□□ -1.3
USH2AO75445 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC6.95□□□□□ -1.3
USH2AO75445 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC6.95□□□□□ -1.3
USH2AO75445 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC6.95□□□□□ -1.3
USH2AO75445 HLA-DPA2-205ENST00000433582 733 ntBASIC6.95□□□□□ -1.3
USH2AO75445 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
USH2AO75445 AL627230.2-201ENST00000613254 655 ntBASIC6.95□□□□□ -1.3
USH2AO75445 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC6.95□□□□□ -1.3
USH2AO75445 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC6.95□□□□□ -1.3
USH2AO75445 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC6.95□□□□□ -1.3
USH2AO75445 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
USH2AO75445 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USH2AO75445 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms