Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CACNA1FO60840 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CACNA1FO60840 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.74■□□□□ 0.75
CACNA1FO60840 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.74■□□□□ 0.75
CACNA1FO60840 PTP4A1P2-201ENST00000546033 454 ntBASIC19.74■□□□□ 0.75
CACNA1FO60840 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.74■□□□□ 0.75
CACNA1FO60840 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
CACNA1FO60840 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.74■□□□□ 0.75
CACNA1FO60840 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 PPT1-215ENST00000641471 2368 ntBASIC19.74■□□□□ 0.75
CACNA1FO60840 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CACNA1FO60840 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CACNA1FO60840 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.74■□□□□ 0.75
CACNA1FO60840 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CACNA1FO60840 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CACNA1FO60840 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CACNA1FO60840 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1FO60840 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.74■□□□□ 0.75
CACNA1FO60840 SNX29P1-201ENST00000548357 1007 ntBASIC19.74■□□□□ 0.75
CACNA1FO60840 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC19.74■□□□□ 0.75
CACNA1FO60840 AL033527.5-201ENST00000641382 801 ntBASIC19.74■□□□□ 0.75
CACNA1FO60840 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1FO60840 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1FO60840 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1FO60840 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1FO60840 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1FO60840 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1FO60840 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1FO60840 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CACNA1FO60840 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1FO60840 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1FO60840 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1FO60840 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.73■□□□□ 0.75
CACNA1FO60840 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.73■□□□□ 0.75
CACNA1FO60840 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.73■□□□□ 0.75
CACNA1FO60840 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.73■□□□□ 0.75
CACNA1FO60840 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.73■□□□□ 0.75
CACNA1FO60840 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.73■□□□□ 0.75
CACNA1FO60840 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.73■□□□□ 0.75
CACNA1FO60840 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.73■□□□□ 0.75
CACNA1FO60840 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1FO60840 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.73■□□□□ 0.75
CACNA1FO60840 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1FO60840 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.72■□□□□ 0.75
CACNA1FO60840 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.72■□□□□ 0.75
CACNA1FO60840 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.72■□□□□ 0.75
CACNA1FO60840 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CACNA1FO60840 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CACNA1FO60840 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CACNA1FO60840 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.72■□□□□ 0.75
CACNA1FO60840 FTH1P14-201ENST00000482930 551 ntBASIC19.72■□□□□ 0.75
CACNA1FO60840 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CACNA1FO60840 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.72■□□□□ 0.75
CACNA1FO60840 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.72■□□□□ 0.75
CACNA1FO60840 AL359711.2-201ENST00000563105 872 ntBASIC19.72■□□□□ 0.75
CACNA1FO60840 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.72■□□□□ 0.75
CACNA1FO60840 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
CACNA1FO60840 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CACNA1FO60840 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CACNA1FO60840 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.72■□□□□ 0.75
CACNA1FO60840 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.72■□□□□ 0.75
CACNA1FO60840 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.72■□□□□ 0.75
CACNA1FO60840 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.72■□□□□ 0.75
CACNA1FO60840 AC106886.1-201ENST00000568660 600 ntBASIC19.72■□□□□ 0.75
CACNA1FO60840 AC025279.2-201ENST00000569730 653 ntBASIC19.72■□□□□ 0.75
CACNA1FO60840 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1FO60840 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.71■□□□□ 0.75
CACNA1FO60840 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.71■□□□□ 0.75
CACNA1FO60840 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms