Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.14■□□□□ 0.17
PRAMEF11O60813 HMGN1P19-201ENST00000436976 333 ntBASIC16.14■□□□□ 0.17
PRAMEF11O60813 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 UGT1A2P-201ENST00000454886 866 ntBASIC16.14■□□□□ 0.17
PRAMEF11O60813 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 AC011467.4-201ENST00000594891 528 ntBASIC16.14■□□□□ 0.17
PRAMEF11O60813 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 AC004840.1-201ENST00000636359 365 ntBASIC16.14■□□□□ 0.17
PRAMEF11O60813 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF11O60813 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
PRAMEF11O60813 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF11O60813 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF11O60813 PRAL-201ENST00000624952 3286 ntBASIC16.13■□□□□ 0.17
PRAMEF11O60813 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF11O60813 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF11O60813 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.13■□□□□ 0.17
PRAMEF11O60813 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF11O60813 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEF11O60813 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF11O60813 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF11O60813 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF11O60813 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEF11O60813 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF11O60813 RPL13P2-201ENST00000440687 659 ntBASIC16.13■□□□□ 0.17
PRAMEF11O60813 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF11O60813 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.13■□□□□ 0.17
PRAMEF11O60813 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEF11O60813 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.13■□□□□ 0.17
PRAMEF11O60813 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.13■□□□□ 0.17
PRAMEF11O60813 AC004461.2-201ENST00000629517 803 ntBASIC16.13■□□□□ 0.17
PRAMEF11O60813 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEF11O60813 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEF11O60813 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF11O60813 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF11O60813 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF11O60813 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF11O60813 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF11O60813 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF11O60813 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF11O60813 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF11O60813 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF11O60813 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF11O60813 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 AC135586.1-201ENST00000539323 574 ntBASIC16.12■□□□□ 0.17
PRAMEF11O60813 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF11O60813 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 LINC01115-203ENST00000606068 577 ntBASIC16.12■□□□□ 0.17
PRAMEF11O60813 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF11O60813 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF11O60813 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF11O60813 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms