Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL13O43927 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
CXCL13O43927 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CXCL13O43927 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCL13O43927 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCL13O43927 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL13O43927 AL603832.2-201ENST00000566195 2125 ntBASIC14.29□□□□□ -0.12
CXCL13O43927 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CXCL13O43927 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL13O43927 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CXCL13O43927 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CXCL13O43927 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
CXCL13O43927 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL13O43927 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
CXCL13O43927 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
CXCL13O43927 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL13O43927 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CXCL13O43927 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL13O43927 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CXCL13O43927 PHKG1P2-201ENST00000457537 863 ntBASIC14.28□□□□□ -0.12
CXCL13O43927 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.28□□□□□ -0.12
CXCL13O43927 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 SDHAP3-202ENST00000515467 728 ntBASIC14.28□□□□□ -0.12
CXCL13O43927 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.28□□□□□ -0.12
CXCL13O43927 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.28□□□□□ -0.12
CXCL13O43927 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.28□□□□□ -0.12
CXCL13O43927 AC010491.1-201ENST00000563101 2797 ntBASIC14.28□□□□□ -0.12
CXCL13O43927 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CXCL13O43927 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.28□□□□□ -0.12
CXCL13O43927 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.28□□□□□ -0.12
CXCL13O43927 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.28□□□□□ -0.12
CXCL13O43927 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CXCL13O43927 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.28□□□□□ -0.12
CXCL13O43927 AC011477.6-201ENST00000604980 1927 ntBASIC14.28□□□□□ -0.12
CXCL13O43927 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CXCL13O43927 AC018892.3-201ENST00000623986 2499 ntBASIC14.28□□□□□ -0.12
CXCL13O43927 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CXCL13O43927 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL13O43927 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL13O43927 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CXCL13O43927 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL13O43927 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CXCL13O43927 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL13O43927 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL13O43927 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.27□□□□□ -0.12
CXCL13O43927 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL13O43927 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL13O43927 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL13O43927 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.27□□□□□ -0.12
CXCL13O43927 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.27□□□□□ -0.12
CXCL13O43927 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
CXCL13O43927 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL13O43927 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.27□□□□□ -0.12
CXCL13O43927 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL13O43927 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL13O43927 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL13O43927 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL13O43927 AC068587.6-202ENST00000641839 5619 ntBASIC14.27□□□□□ -0.12
CXCL13O43927 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.27□□□□□ -0.12
CXCL13O43927 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL13O43927 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.27□□□□□ -0.12
CXCL13O43927 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.27□□□□□ -0.13
CXCL13O43927 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.27□□□□□ -0.13
CXCL13O43927 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.27□□□□□ -0.13
CXCL13O43927 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCL13O43927 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.27□□□□□ -0.13
CXCL13O43927 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCL13O43927 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.27□□□□□ -0.13
CXCL13O43927 ZNF890P-202ENST00000530367 1156 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms