Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMX2-CTNND1H3BSU7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 RPL37AP1-201ENST00000412502 279 ntBASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 COX5BP8-201ENST00000416911 349 ntBASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 SERBP1P3-201ENST00000459980 809 ntBASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 AL079307.3-201ENST00000556114 283 ntBASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 SNX18-202ENST00000343017 3140 ntBASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMX2-CTNND1H3BSU7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 AC009407.1-201ENST00000568958 598 ntBASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 AC140912.1-201ENST00000577171 1054 ntBASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 AC020765.3-201ENST00000613051 740 ntBASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms