Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB11Q9Y5F2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PCDHB11Q9Y5F2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB11Q9Y5F2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB11Q9Y5F2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB11Q9Y5F2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHB11Q9Y5F2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB11Q9Y5F2 AC022616.5-201ENST00000518796 181 ntBASIC22.98■■□□□ 1.27
PCDHB11Q9Y5F2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.98■■□□□ 1.27
PCDHB11Q9Y5F2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
PCDHB11Q9Y5F2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB11Q9Y5F2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB11Q9Y5F2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.97■■□□□ 1.27
PCDHB11Q9Y5F2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB11Q9Y5F2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB11Q9Y5F2 KRT125P-201ENST00000546827 989 ntBASIC22.97■■□□□ 1.27
PCDHB11Q9Y5F2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PCDHB11Q9Y5F2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB11Q9Y5F2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB11Q9Y5F2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHB11Q9Y5F2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.96■■□□□ 1.27
PCDHB11Q9Y5F2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB11Q9Y5F2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB11Q9Y5F2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB11Q9Y5F2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB11Q9Y5F2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB11Q9Y5F2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB11Q9Y5F2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
PCDHB11Q9Y5F2 AC008406.3-201ENST00000620001 1374 ntBASIC22.95■■□□□ 1.26
PCDHB11Q9Y5F2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
PCDHB11Q9Y5F2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHB11Q9Y5F2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHB11Q9Y5F2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHB11Q9Y5F2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
PCDHB11Q9Y5F2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHB11Q9Y5F2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDHB11Q9Y5F2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHB11Q9Y5F2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHB11Q9Y5F2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHB11Q9Y5F2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHB11Q9Y5F2 BX664725.1-201ENST00000438252 379 ntBASIC22.92■■□□□ 1.26
PCDHB11Q9Y5F2 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.92■■□□□ 1.26
PCDHB11Q9Y5F2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHB11Q9Y5F2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHB11Q9Y5F2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHB11Q9Y5F2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
PCDHB11Q9Y5F2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PCDHB11Q9Y5F2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHB11Q9Y5F2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHB11Q9Y5F2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHB11Q9Y5F2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHB11Q9Y5F2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHB11Q9Y5F2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHB11Q9Y5F2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHB11Q9Y5F2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHB11Q9Y5F2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHB11Q9Y5F2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHB11Q9Y5F2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PCDHB11Q9Y5F2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
PCDHB11Q9Y5F2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHB11Q9Y5F2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.9■■□□□ 1.26
PCDHB11Q9Y5F2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHB11Q9Y5F2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHB11Q9Y5F2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.89■■□□□ 1.26
PCDHB11Q9Y5F2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDHB11Q9Y5F2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.89■■□□□ 1.25
PCDHB11Q9Y5F2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHB11Q9Y5F2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHB11Q9Y5F2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHB11Q9Y5F2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
PCDHB11Q9Y5F2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHB11Q9Y5F2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHB11Q9Y5F2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDHB11Q9Y5F2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHB11Q9Y5F2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHB11Q9Y5F2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHB11Q9Y5F2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHB11Q9Y5F2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHB11Q9Y5F2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
PCDHB11Q9Y5F2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHB11Q9Y5F2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB11Q9Y5F2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB11Q9Y5F2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
PCDHB11Q9Y5F2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.86■■□□□ 1.25
PCDHB11Q9Y5F2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB11Q9Y5F2 MIR4787-201ENST00000607364 84 ntBASIC22.86■■□□□ 1.25
PCDHB11Q9Y5F2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms