Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM4Q9Y4Z0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSM4Q9Y4Z0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LSM4Q9Y4Z0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.7■□□□□ 0.58
LSM4Q9Y4Z0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSM4Q9Y4Z0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM4Q9Y4Z0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSM4Q9Y4Z0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.7■□□□□ 0.58
LSM4Q9Y4Z0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM4Q9Y4Z0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM4Q9Y4Z0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LSM4Q9Y4Z0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSM4Q9Y4Z0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM4Q9Y4Z0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.7■□□□□ 0.58
LSM4Q9Y4Z0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM4Q9Y4Z0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSM4Q9Y4Z0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM4Q9Y4Z0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM4Q9Y4Z0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM4Q9Y4Z0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM4Q9Y4Z0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM4Q9Y4Z0 AC007029.1-201ENST00000604183 313 ntBASIC18.68■□□□□ 0.58
LSM4Q9Y4Z0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.68■□□□□ 0.58
LSM4Q9Y4Z0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM4Q9Y4Z0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM4Q9Y4Z0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM4Q9Y4Z0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 AC129492.7-201ENST00000622992 756 ntBASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LSM4Q9Y4Z0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSM4Q9Y4Z0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.66■□□□□ 0.58
LSM4Q9Y4Z0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM4Q9Y4Z0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LSM4Q9Y4Z0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM4Q9Y4Z0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LSM4Q9Y4Z0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM4Q9Y4Z0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.65■□□□□ 0.58
LSM4Q9Y4Z0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM4Q9Y4Z0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM4Q9Y4Z0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.65■□□□□ 0.58
LSM4Q9Y4Z0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM4Q9Y4Z0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LSM4Q9Y4Z0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM4Q9Y4Z0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM4Q9Y4Z0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LSM4Q9Y4Z0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM4Q9Y4Z0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM4Q9Y4Z0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.64■□□□□ 0.57
LSM4Q9Y4Z0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.64■□□□□ 0.57
LSM4Q9Y4Z0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM4Q9Y4Z0 AC068473.5-201ENST00000616428 2072 ntBASIC18.64■□□□□ 0.57
LSM4Q9Y4Z0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LSM4Q9Y4Z0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 AL592293.1-201ENST00000502889 1188 ntBASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 AC133552.2-201ENST00000619106 1032 ntBASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 AC009831.1-201ENST00000580420 1582 ntBASIC18.63■□□□□ 0.57
LSM4Q9Y4Z0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM4Q9Y4Z0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LSM4Q9Y4Z0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.62■□□□□ 0.57
LSM4Q9Y4Z0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM4Q9Y4Z0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LSM4Q9Y4Z0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LSM4Q9Y4Z0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.62■□□□□ 0.57
LSM4Q9Y4Z0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
LSM4Q9Y4Z0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM4Q9Y4Z0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms