Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CDC42EP3Q9UKI2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.53■□□□□ 0.72
CDC42EP3Q9UKI2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.53■□□□□ 0.72
CDC42EP3Q9UKI2 MIR4281-201ENST00000580852 62 ntBASIC19.53■□□□□ 0.72
CDC42EP3Q9UKI2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.53■□□□□ 0.72
CDC42EP3Q9UKI2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42EP3Q9UKI2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42EP3Q9UKI2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.53■□□□□ 0.72
CDC42EP3Q9UKI2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42EP3Q9UKI2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.52■□□□□ 0.72
CDC42EP3Q9UKI2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDC42EP3Q9UKI2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDC42EP3Q9UKI2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.52■□□□□ 0.71
CDC42EP3Q9UKI2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDC42EP3Q9UKI2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.51■□□□□ 0.71
CDC42EP3Q9UKI2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42EP3Q9UKI2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42EP3Q9UKI2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CDC42EP3Q9UKI2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42EP3Q9UKI2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.51■□□□□ 0.71
CDC42EP3Q9UKI2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CDC42EP3Q9UKI2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42EP3Q9UKI2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.51■□□□□ 0.71
CDC42EP3Q9UKI2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.51■□□□□ 0.71
CDC42EP3Q9UKI2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42EP3Q9UKI2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDC42EP3Q9UKI2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDC42EP3Q9UKI2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDC42EP3Q9UKI2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDC42EP3Q9UKI2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.5■□□□□ 0.71
CDC42EP3Q9UKI2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.5■□□□□ 0.71
CDC42EP3Q9UKI2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.5■□□□□ 0.71
CDC42EP3Q9UKI2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42EP3Q9UKI2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42EP3Q9UKI2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42EP3Q9UKI2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42EP3Q9UKI2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42EP3Q9UKI2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42EP3Q9UKI2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDC42EP3Q9UKI2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDC42EP3Q9UKI2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42EP3Q9UKI2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42EP3Q9UKI2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42EP3Q9UKI2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CDC42EP3Q9UKI2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDC42EP3Q9UKI2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.48■□□□□ 0.71
CDC42EP3Q9UKI2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.48■□□□□ 0.71
CDC42EP3Q9UKI2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42EP3Q9UKI2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.48■□□□□ 0.71
CDC42EP3Q9UKI2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42EP3Q9UKI2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.48■□□□□ 0.71
CDC42EP3Q9UKI2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42EP3Q9UKI2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42EP3Q9UKI2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.47■□□□□ 0.71
CDC42EP3Q9UKI2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.47■□□□□ 0.71
CDC42EP3Q9UKI2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.47■□□□□ 0.71
CDC42EP3Q9UKI2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.47■□□□□ 0.71
CDC42EP3Q9UKI2 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.47■□□□□ 0.71
CDC42EP3Q9UKI2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42EP3Q9UKI2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42EP3Q9UKI2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.47■□□□□ 0.71
CDC42EP3Q9UKI2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.46■□□□□ 0.71
CDC42EP3Q9UKI2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.46■□□□□ 0.71
CDC42EP3Q9UKI2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.46■□□□□ 0.71
CDC42EP3Q9UKI2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.46■□□□□ 0.71
CDC42EP3Q9UKI2 AC092666.2-201ENST00000613287 246 ntBASIC19.46■□□□□ 0.71
CDC42EP3Q9UKI2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42EP3Q9UKI2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDC42EP3Q9UKI2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CDC42EP3Q9UKI2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 MIR4466-201ENST00000606121 54 ntBASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42EP3Q9UKI2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
CDC42EP3Q9UKI2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP3Q9UKI2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP3Q9UKI2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.44■□□□□ 0.7
CDC42EP3Q9UKI2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC42EP3Q9UKI2 AC011551.1-201ENST00000614101 683 ntBASIC19.44■□□□□ 0.7
CDC42EP3Q9UKI2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDC42EP3Q9UKI2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP3Q9UKI2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC42EP3Q9UKI2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP3Q9UKI2 RARRES2P6-201ENST00000567333 442 ntBASIC19.43■□□□□ 0.7
CDC42EP3Q9UKI2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CDC42EP3Q9UKI2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP3Q9UKI2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP3Q9UKI2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CDC42EP3Q9UKI2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP3Q9UKI2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP3Q9UKI2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 265.2 ms